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The map label for this gene is 148824116

Identifier: 148824116

GI number: 148824116

Start: 3252021

End: 3252644

Strand: Reverse

Name: 148824116

Synonym: TBFG_12941

Alternate gene names: NA

Gene position: 3252644-3252021 (Counterclockwise)

Preceding gene: 148824117

Following gene: 148824115

Centisome position: 73.52

GC content: 65.54

Gene sequence:

>624_bases
GTGGATCTGGGTGGCGTGCGCCGTAGGATTTCTCTTATGGCCAGGCAGCACGGTCCCACTGCGCAGCGACATGTGGCGTC
GCCGATGACGGTCGACATCGCACGGTTGGGGCGACGACCGGGAGCGATGTTCGAGCTGCATGACACCGTGCACAGCCCCG
CACGCATCGGGCTGGAGCTGATCGCGATTGACCAGGGCGCCCTTCTGGACCTGGATCTGCGGGTCGAGTCGGTGTCCGAA
GGCGTGTTGGTGACCGGGACCGTGGCCGCCCCGACCGTCGGCGAGTGTGCTCGTTGCCTCAGCCCGGTGCGGGGTCGCGT
TCAGGTAGCCCTGACCGAACTGTTTGCCTATCCGGATAGCGCCACCGACGAGACCACCGAGGAAGACGAGGTCGGACGCG
TCGTCGACGAAACCATCGATCTCGAGCAGCCGATCATCGATGCGGTCGGTCTGGAATTGCCGTTTTCGCCGGTGTGCCGG
CCGGACTGCCCGGGTCTTTGCCCGCAGTGCGGTGTCCCGCTGGCCAGCGAGCCAGGTCATCGCCATGAACAGATCGACCC
GCGGTGGGCGAAGTTGGTCGAAATGCTCGGGCCGGAGTCCGACACATTACGAGGTGAGCGATGA

Upstream 100 bases:

>100_bases
GCCACCAGCTCCGCACAGCGGCCGGCACTCACGACTACGCGGTGCGCTAACACCATTCACCCGGCGCAAGGATCAAGCGC
CGGCCAACGCCCAACGCGGC

Downstream 100 bases:

>100_bases
TCCGGTCACGACAACCCCTGCTCGACGCACTCGGTGTGGACCTCCCGGACGAGCTGCTCTCACTGGCGTTGACCCACCGC
AGCTACGCCTACGAGAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDLGGVRRRISLMARQHGPTAQRHVASPMTVDIARLGRRPGAMFELHDTVHSPARIGLELIAIDQGALLDLDLRVESVSE
GVLVTGTVAAPTVGECARCLSPVRGRVQVALTELFAYPDSATDETTEEDEVGRVVDETIDLEQPIIDAVGLELPFSPVCR
PDCPGLCPQCGVPLASEPGHRHEQIDPRWAKLVEMLGPESDTLRGER

Sequences:

>Translated_207_residues
MDLGGVRRRISLMARQHGPTAQRHVASPMTVDIARLGRRPGAMFELHDTVHSPARIGLELIAIDQGALLDLDLRVESVSE
GVLVTGTVAAPTVGECARCLSPVRGRVQVALTELFAYPDSATDETTEEDEVGRVVDETIDLEQPIIDAVGLELPFSPVCR
PDCPGLCPQCGVPLASEPGHRHEQIDPRWAKLVEMLGPESDTLRGER
>Mature_207_residues
MDLGGVRRRISLMARQHGPTAQRHVASPMTVDIARLGRRPGAMFELHDTVHSPARIGLELIAIDQGALLDLDLRVESVSE
GVLVTGTVAAPTVGECARCLSPVRGRVQVALTELFAYPDSATDETTEEDEVGRVVDETIDLEQPIIDAVGLELPFSPVCR
PDCPGLCPQCGVPLASEPGHRHEQIDPRWAKLVEMLGPESDTLRGER

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1660

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2926_MYCTU (P65057)

Other databases:

- EMBL:   BX842581
- EMBL:   AE000516
- PIR:   F70748
- RefSeq:   NP_217442.1
- RefSeq:   NP_337509.1
- EnsemblBacteria:   EBMYCT00000000661
- EnsemblBacteria:   EBMYCT00000070547
- GeneID:   887487
- GeneID:   925281
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2996
- KEGG:   mtu:Rv2926c
- TIGR:   MT2996
- TubercuList:   Rv2926c
- GeneTree:   EBGT00050000017199
- HOGENOM:   HBG457387
- OMA:   GLCSECG
- ProtClustDB:   CLSK792165
- GO:   GO:0040007
- InterPro:   IPR003772

Pfam domain/function: PF02620 DUF177

EC number: NA

Molecular weight: Translated: 22411; Mature: 22411

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGGVRRRISLMARQHGPTAQRHVASPMTVDIARLGRRPGAMFELHDTVHSPARIGLEL
CCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHCCCCCCEEEEHHHHCCHHHCCEEE
IAIDQGALLDLDLRVESVSEGVLVTGTVAAPTVGECARCLSPVRGRVQVALTELFAYPDS
EEECCCCEEEEEEEHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATDETTEEDEVGRVVDETIDLEQPIIDAVGLELPFSPVCRPDCPGLCPQCGVPLASEPGH
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RHEQIDPRWAKLVEMLGPESDTLRGER
CCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDLGGVRRRISLMARQHGPTAQRHVASPMTVDIARLGRRPGAMFELHDTVHSPARIGLEL
CCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHCCCCCCEEEEHHHHCCHHHCCEEE
IAIDQGALLDLDLRVESVSEGVLVTGTVAAPTVGECARCLSPVRGRVQVALTELFAYPDS
EEECCCCEEEEEEEHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ATDETTEEDEVGRVVDETIDLEQPIIDAVGLELPFSPVCRPDCPGLCPQCGVPLASEPGH
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RHEQIDPRWAKLVEMLGPESDTLRGER
CCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036