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The map label for this gene is rimP

Identifier: 148824032

GI number: 148824032

Start: 3161063

End: 3161614

Strand: Reverse

Name: rimP

Synonym: TBFG_12857

Alternate gene names: 148824032

Gene position: 3161614-3161063 (Counterclockwise)

Preceding gene: 148824035

Following gene: 148824031

Centisome position: 71.46

GC content: 65.76

Gene sequence:

>552_bases
GTGACCACCGGGCTACCTTCGCAGAGGCAGGTGATCGAGCTACTCGGTGCAGATTTCGCGTGCGCCGGCTACGAGATCGA
AGACGTGGTCATCGATGCGCGGGCCCGCCCGCCGCGGATAGCGGTGATCGCCGACGGTGACGCCCCTCTCGACCTGGATA
CGATAGCCGCATTGTCGCGCAGGGCATCGGCTTTGCTGGACGGCCTGGACGGTGCGAACAAGATCCGGGGCCGCTACCTG
CTCGAGGTCAGCTCTCCCGGTGTGGAACGCCCGCTGACCAGCGAAAAGCACTTCCGCCGTGCTCGAGGCCGCAAGGTTGA
GCTGGTGTTGTCAGACGGATCGCGACTGACCGGCCGGGTCGGCGAGATGCGTGCTGGCACGGTGGCGTTGGTGATCCGGG
AAGACCGGGGCTGGGCAGTCCGTGAGATCCCGCTTGCTGAGATTGTGAAAGCTGTTGTCCAGGTTGAGTTTTCGCCACCG
GCTCCGGCGGAGTTGGAACTGGCCCAGTCTTCCGAGATGGGGCTGGCCCGCGGGACGGAGGCCGGAGCATGA

Upstream 100 bases:

>100_bases
TTGGTAGCTACGCCGGCTGCTGCGTGCCGGCGGGACACTGGGAGCCGCCCTGGCGGCGCCTCCGCTAGATGACCGGACAA
CTCAAGATGAGGAGCTCGCC

Downstream 100 bases:

>100_bases
ACATCGACATGGCTGCTCTGCATGCCATCGAGGTGGACCGGGGTATCTCGGTCAATGAACTGCTCGAAACGATCAAGTCC
GCGCTGTTGACTGCCTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTTGLPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLDGLDGANKIRGRYL
LEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMRAGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPP
APAELELAQSSEMGLARGTEAGA

Sequences:

>Translated_183_residues
MTTGLPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLDGLDGANKIRGRYL
LEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMRAGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPP
APAELELAQSSEMGLARGTEAGA
>Mature_182_residues
TTGLPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSRRASALLDGLDGANKIRGRYLL
EVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRVGEMRAGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPA
PAELELAQSSEMGLARGTEAGA

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_MYCBO (P67215)

Other databases:

- EMBL:   BX248343
- RefSeq:   NP_856512.1
- ProteinModelPortal:   P67215
- SMR:   P67215
- EnsemblBacteria:   EBMYCT00000014489
- GeneID:   1092242
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb2867c
- GeneTree:   EBGT00050000015899
- HOGENOM:   HBG668072
- OMA:   STTQSER
- ProtClustDB:   PRK00092
- BioCyc:   MBOV233413:MB2867C-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19566; Mature: 19434

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGLPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSR
CCCCCCCHHHHHHHHCCCCEECCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHH
RASALLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRV
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCEEECCC
GEMRAGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMGLARGTE
CCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCCCCC
AGA
CCC
>Mature Secondary Structure 
TTGLPSQRQVIELLGADFACAGYEIEDVVIDARARPPRIAVIADGDAPLDLDTIAALSR
CCCCCCHHHHHHHHCCCCEECCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHH
RASALLDGLDGANKIRGRYLLEVSSPGVERPLTSEKHFRRARGRKVELVLSDGSRLTGRV
HHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCEEECCC
GEMRAGTVALVIREDRGWAVREIPLAEIVKAVVQVEFSPPAPAELELAQSSEMGLARGTE
CCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCCCCC
AGA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972