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The map label for this gene is 148823949

Identifier: 148823949

GI number: 148823949

Start: 3083501

End: 3084595

Strand: Reverse

Name: 148823949

Synonym: TBFG_12774

Alternate gene names: NA

Gene position: 3084595-3083501 (Counterclockwise)

Preceding gene: 148823950

Following gene: 148823948

Centisome position: 69.72

GC content: 63.65

Gene sequence:

>1095_bases
ATGAGCCGCGTCGAGAAAGTCGAAAAGGTAAGGCTAGGGGACCATCTCGACTTCTCGAATGGCCATACGTCTGGCCATAC
GTCGCCAGCGAGCGAGCCCGGCGGCCGCTATCCCGTCTATGGTGCAAACGGGGTTATCGGATATTCCGCCCAACACAACG
CGCGTGGCCCGCTGATCGTCGTCGGCCGCGTCGGCTCGTACTGCGGTAGCCTGCGCTATTGCGATTCCGACGTGTGGGTG
ACCGACAACGCGCTGGCGTGTCGGGCCAAGAAGCCCGAGGAAACCCGATATTGGTATTACGCGCTACTGGGTTTCGGGCT
CAACCGATATCGGGCCGGATCGGGACAGCCCCTGCTGAGTCAGGGTGTTCTGCGGAACGTTTCGGTATCGGCCGTCGCCG
CGCCCGACCGCCCTCGAATCGGCGAGATCCTAGGCGCCTTCGACGACAAGATCGCCGCCAACGACCGTGTCATCGAAGCC
GCCGAGGCGTTGATGCTTGCGATCGTCGGGCGGCTCTCTGCATACGTGCCGTTGTCGAGCCTGGCGAGCAGGTCAACCGC
ATGTCTTGATGCGCAGCACTTCGATAGCACCGTCGCCCATTACAGTTTCGCGGCATTCGACGGCGGCGCCCAGCCCAGTC
GCGTCGGTGGGCGAACGATCAGGAGCGCAAAGCTCGTCGTGTCGCAGCCGTGTGTGTTGTTCCCGAAACTGAATCCAAGA
ATCCCGCGAATCTGGAACATCACCAGCCTCCCGTCGGAAATGGCGCTGGCGAGTACGGAGTTCGTCGTGCTGCGGCCAGT
CGGCGTCGACACTTCGGCCCTGTGGGCGGCGCTGCGACAACCCGATGTCCTGGCAGAACTGCGGCAGTTAGTCGGGGGCA
TGACGGGAAGCCGGCAACGAATCCAACCGACCCAGCTGTTGCGGGTTTGGGTGCGCGATGTGCGCCGGTTGACTCCCGGA
CACGCGGCCGCAATCGCGAACCTGGGTGCGCTGTGCAACGAGCGGCGGATTGAATCCGCACGCCTGGCATCCTGCCGCGA
TGCGCTGCTTCCGCTGTTGATGTCCGGGATAGATGGTCTACCCGCTGGCCGGTAG

Upstream 100 bases:

>100_bases
TGGCGTCGATGGCGTCGTGGCTGGGATTGGGGGGGATCGCCGTGTCCACCCGGGGTGATCTGGCTGGGGAACTGTGCGCG
GCCACCAAGCGGACTAACGG

Downstream 100 bases:

>100_bases
CCTTCTACCATGAGCCTCAATATCAAGAGCCAGCGCACCGTGGCGCTGGTGCGGGAACTGGCCGCACGCACCGGCACCAA
CCAGACGGCTGCTGTCGAGG

Product: type I restriction/modification system specificity determinant hsdS

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Type I Restriction- System S Subunit; Type I Site-Specific Deoxyribonuclease S Subunit; Type I Restriction/ System Specificity Determinant HsdS; Type I Site-Specific Deoxyribonucleacificity Subunit; Type I Restriction EcoEI Specificity Protein; Type I Restriction Endonuclease S Subunit; Type I Restriction- System Methyltransferase Subunit; Type I Restriction- System Specificity Determinant; Type I Restriction/; Type I Restriction- System Specificity Subunit; Type I Restriction System Methylase; Restriction Endonuclease S Subunit; Restriction System DNA Specificity Domain; Type I Site-Specific Deoxyribonuclease; Restriction Endonuclease S Subunits

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSRVEKVEKVRLGDHLDFSNGHTSGHTSPASEPGGRYPVYGANGVIGYSAQHNARGPLIVVGRVGSYCGSLRYCDSDVWV
TDNALACRAKKPEETRYWYYALLGFGLNRYRAGSGQPLLSQGVLRNVSVSAVAAPDRPRIGEILGAFDDKIAANDRVIEA
AEALMLAIVGRLSAYVPLSSLASRSTACLDAQHFDSTVAHYSFAAFDGGAQPSRVGGRTIRSAKLVVSQPCVLFPKLNPR
IPRIWNITSLPSEMALASTEFVVLRPVGVDTSALWAALRQPDVLAELRQLVGGMTGSRQRIQPTQLLRVWVRDVRRLTPG
HAAAIANLGALCNERRIESARLASCRDALLPLLMSGIDGLPAGR

Sequences:

>Translated_364_residues
MSRVEKVEKVRLGDHLDFSNGHTSGHTSPASEPGGRYPVYGANGVIGYSAQHNARGPLIVVGRVGSYCGSLRYCDSDVWV
TDNALACRAKKPEETRYWYYALLGFGLNRYRAGSGQPLLSQGVLRNVSVSAVAAPDRPRIGEILGAFDDKIAANDRVIEA
AEALMLAIVGRLSAYVPLSSLASRSTACLDAQHFDSTVAHYSFAAFDGGAQPSRVGGRTIRSAKLVVSQPCVLFPKLNPR
IPRIWNITSLPSEMALASTEFVVLRPVGVDTSALWAALRQPDVLAELRQLVGGMTGSRQRIQPTQLLRVWVRDVRRLTPG
HAAAIANLGALCNERRIESARLASCRDALLPLLMSGIDGLPAGR
>Mature_363_residues
SRVEKVEKVRLGDHLDFSNGHTSGHTSPASEPGGRYPVYGANGVIGYSAQHNARGPLIVVGRVGSYCGSLRYCDSDVWVT
DNALACRAKKPEETRYWYYALLGFGLNRYRAGSGQPLLSQGVLRNVSVSAVAAPDRPRIGEILGAFDDKIAANDRVIEAA
EALMLAIVGRLSAYVPLSSLASRSTACLDAQHFDSTVAHYSFAAFDGGAQPSRVGGRTIRSAKLVVSQPCVLFPKLNPRI
PRIWNITSLPSEMALASTEFVVLRPVGVDTSALWAALRQPDVLAELRQLVGGMTGSRQRIQPTQLLRVWVRDVRRLTPGH
AAAIANLGALCNERRIESARLASCRDALLPLLMSGIDGLPAGR

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39212; Mature: 39081

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVEKVEKVRLGDHLDFSNGHTSGHTSPASEPGGRYPVYGANGVIGYSAQHNARGPLIV
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE
VGRVGSYCGSLRYCDSDVWVTDNALACRAKKPEETRYWYYALLGFGLNRYRAGSGQPLLS
EECCHHHHCCCEEECCCCEEECCCEEECCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHH
QGVLRNVSVSAVAAPDRPRIGEILGAFDDKIAANDRVIEAAEALMLAIVGRLSAYVPLSS
HHHHHCCCEEEEECCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LASRSTACLDAQHFDSTVAHYSFAAFDGGAQPSRVGGRTIRSAKLVVSQPCVLFPKLNPR
HHCCHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHEHEECCCEEEECCCCCC
IPRIWNITSLPSEMALASTEFVVLRPVGVDTSALWAALRQPDVLAELRQLVGGMTGSRQR
CCCEEECCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
IQPTQLLRVWVRDVRRLTPGHAAAIANLGALCNERRIESARLASCRDALLPLLMSGIDGL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAGR
CCCC
>Mature Secondary Structure 
SRVEKVEKVRLGDHLDFSNGHTSGHTSPASEPGGRYPVYGANGVIGYSAQHNARGPLIV
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE
VGRVGSYCGSLRYCDSDVWVTDNALACRAKKPEETRYWYYALLGFGLNRYRAGSGQPLLS
EECCHHHHCCCEEECCCCEEECCCEEECCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHH
QGVLRNVSVSAVAAPDRPRIGEILGAFDDKIAANDRVIEAAEALMLAIVGRLSAYVPLSS
HHHHHCCCEEEEECCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
LASRSTACLDAQHFDSTVAHYSFAAFDGGAQPSRVGGRTIRSAKLVVSQPCVLFPKLNPR
HHCCHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHEHEECCCEEEECCCCCC
IPRIWNITSLPSEMALASTEFVVLRPVGVDTSALWAALRQPDVLAELRQLVGGMTGSRQR
CCCEEECCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
IQPTQLLRVWVRDVRRLTPGHAAAIANLGALCNERRIESARLASCRDALLPLLMSGIDGL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAGR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA