| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is ygjT [C]
Identifier: 148823911
GI number: 148823911
Start: 3046864
End: 3048057
Strand: Direct
Name: ygjT [C]
Synonym: TBFG_12736
Alternate gene names: 148823911
Gene position: 3046864-3048057 (Clockwise)
Preceding gene: 148823909
Following gene: 148823918
Centisome position: 68.86
GC content: 59.88
Gene sequence:
>1194_bases ATGGGTGCTTCCGGCCTGGTCTGGACCCTCACCATCGTCCTGATCGCCGGCTTGATGTTGGTCGACTACGTCCTCCACGT ACGCAAGACCCATGTACCGACGTTACGTCAGGCCGTCATCCAGTCGGCGACCTTCGTGGGGATAGCGATCCTGTTCGGCA TCGCAGTGGTGGTGTTCGGCGGCTCAGAGCTGGCGGTCGAATATTTCGCCTGCTACCTGACCGACGAAGCCCTGTCGGTC GACAACCTGTTCGTATTTCTGGTCATCATCAGCAGCTTCGGGGTGCCTCGTCTCGCGCAACAAAAGGTGCTGTTGTTCGG TATCGCGTTTGCGCTCGTCACGCGCACCGGATTCATCTTCGTCGGCGCCGCGCTCATCGAGAACTTCAACTCGGCCTTTT ACCTGTTCGGCCTGGTCCTACTGGTCATGGCGGGCAACCTCGCCAGACCCACCGGGCTAGAAAGCCGCGACGCCGAAACG CTCAAGAGGTCCGTCATTATCCGGCTAGCCGACCGCTTCTTGCGGACCTCACAGGACTACAACGGAGACCGGTTGTTCAC GGTCTCGAACAACAAGCGAATGATGACCCCGTTGTTGCTGGTCATGATCGCCGTGGGTGGCACTGACATACTATTTGCGT TCGATTCGATTCCAGCACTTTTCGGCCTGACCCAAAACGTCTATCTGGTGTTCGCCGCCACCGCGTTCTCGCTGTTGGGC CTGCGCCAGCTGTACTTCTTGATCGACGGCCTGCTGGATCGGCTAGTCTATCTGTCTTACGGGTTGGCCGTGATTCTTGG CTTCATCGGCGTCAAACTGATGCTGGAAGCATTGCACGACAACAAGATTCCGTTCATCAACGGCGGCAAGCCGGTCCCGA CCGTGGAGGTGAGCACCACCCAGTCGTTGACGGTGATCATCATCGTCCTGCTGATCACGACCGCGGCGTCGTTCTGGTCG GCGCGCGGACGGGCGCAGAACGCCATGGCGAGGGCCCGGCGGTATGCAACCGCATACCTCGACCTGCACTATGAGACCGA GTCGGCCGAACGCGACAAGATCTTTACCGCACTGCTGGCCGCTGAACGCCAGATCAACACTCTCCCAACGAAATACCGCA TGCAGCCCGGACAGGACGACGACCTGATGACGCTGCTGTGCAGGGCCCATGCCGCGCGCGACGCGCACATGTGA
Upstream 100 bases:
>100_bases GCTGCTGTGGTGAGCAACCGGGCTGCAGCCCGGGCCGGGTTTGCGTTACCGTGCCGGAAACGACAACCGGACTGATGCGG TGAGAGGAATCCCGGCTGAC
Downstream 100 bases:
>100_bases GCCCGCGCTAGCTGAGGGCTAGCTGCGCCTAAACACCCAAGCCACGACCGATGATCTCTTTCATGATCTCGGTCGTGCCA CCGTAAATCGTCTGTACCCG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFGGSELAVEYFACYLTDEALSV DNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAET LKRSVIIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTTQSLTVIIIVLLITTAASFWS ARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLAAERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM
Sequences:
>Translated_397_residues MGASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFGGSELAVEYFACYLTDEALSV DNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAET LKRSVIIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTTQSLTVIIIVLLITTAASFWS ARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLAAERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM >Mature_396_residues GASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVD NLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETL KRSVIIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLGL RQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTTQSLTVIIIVLLITTAASFWSA RGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLAAERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family
Homologues:
Organism=Escherichia coli, GI48994922, Length=279, Percent_Identity=34.7670250896057, Blast_Score=157, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2723_MYCTU (P0A614)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: B70505 - RefSeq: NP_217239.1 - RefSeq: NP_337298.1 - EnsemblBacteria: EBMYCT00000000765 - EnsemblBacteria: EBMYCT00000069065 - GeneID: 887768 - GeneID: 925497 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2795 - KEGG: mtu:Rv2723 - TIGR: MT2795 - TubercuList: Rv2723 - GeneTree: EBGT00050000017175 - HOGENOM: HBG292583 - OMA: GLTQNVF - ProtClustDB: CLSK792033 - InterPro: IPR005496 - InterPro: IPR022369 - TIGRFAMs: TIGR03718
Pfam domain/function: PF03741 TerC
EC number: NA
Molecular weight: Translated: 43680; Mature: 43549
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1ab5b238)-; HASH(0x1c89bce0)-; HASH(0x1ca38a80)-; HASH(0x1ca4129c)-; HASH(0x1c89bd58)-; HASH(0x1c8a917c)-; HASH(0x1c89bd40)-; HASH(0x1c5a61fc)-; HASH(0x1c58f5c0)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIF CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSVIIRLADRFLRTSQDY HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHH LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCC QSLTVIIIVLLITTAASFWSARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLA CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH AERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCH >Mature Secondary Structure GASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIF CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSVIIRLADRFLRTSQDY HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHH LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCC QSLTVIIIVLLITTAASFWSARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLA CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH AERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036