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The map label for this gene is yfkH [H]

Identifier: 148823896

GI number: 148823896

Start: 3032528

End: 3033502

Strand: Direct

Name: yfkH [H]

Synonym: TBFG_12721

Alternate gene names: 148823896

Gene position: 3032528-3033502 (Clockwise)

Preceding gene: 148823894

Following gene: 148823897

Centisome position: 68.54

GC content: 62.56

Gene sequence:

>975_bases
ATGAGCGACCAGGTCCCCAAGCCACACCGCCACCACATCTGGCGAATCACCCGTAGGACTTTGTCCAAAAGCTGGGACGA
CTCGATCTTCTCGGAGTCAGCGCAAGCGGCTTTTTGGTCGGCCTTGTCTTTGCCGCCGCTACTGCTGGGAATGCTGGGCA
GTCTGGCCTACGTTGCTCCGCTATTCGGCCCGGACACCTTGCCCGCGATTGAAAAGAGCGCGCTTTCGACGGCCCACAGC
TTTTTCTCCCCCAGTGTGGTCAACGAGATCATCGAGCCCACCATCGGCGATATCACCAACAACGCCCGCGGTGAGGTGGC
GTCGCTGGGCTTCTTGATCTCGCTGTGGGCAGGATCGTCGGCAATCTCGGCGTTCGTCGATGCAGTGGTGGAAGCGCACG
ACCAGACACCGCTACGCCACCCGGTCCGGCAACGCTTCTTTGCGCTCTTCCTCTACGTGGTGATGTTGGTGTTCCTAGTA
GCGACCGCACCGGTAATGGTGGTGGGTCCACGCAAGGTAAGCGAGCACATCCCGGAGAGCTTGGCCAACCTGCTGCGCTA
CGGCTACTACCCCGCGCTTATTCTCGGTCTAACCGTCGGGGTCATCCTGCTATACCGGGTGGCACTACCGGTACCCCTGC
CGACGCATCGGCTGGTCCTAGGCGCGGTGCTTGCGATAGCGGTCTTCCTGATCGCCACCTTGGGCTTGCGGGTCTACCTC
GCGTGGATCACCCGCACTGGCTACACCTACGGAGCGCTGGCCACGCCGATCGCGTTTCTGTTATTCGCCTTCTTTGGCGG
CTTTGCGATCATGCTCGGCGCTGAACTCAACGCCGCCGTCCAGGAGGAATGGCCGGCGCCGGCGACGCATGCCCACCGAC
TGGGCAATTGGCTAAAGGCCCGCATCGGCGTCGGCACGACGACGTATTCTTCGACAGCCCAGCACAGCGCCGTCGCTGCC
GAGCCGCCGAGCTAG

Upstream 100 bases:

>100_bases
GAGATGTCCGCCGTGCTGGAGGTCAGCGGGAGCGAATAGACCGAACTCACCCGTCCACAATGCCGGTAGCGCGCGCAGTT
TTCGGTAATGCTGGACTGGT

Downstream 100 bases:

>100_bases
TCAGCCCTTCTTGAGGGTGTCGTAAATCCGCTTGCAATCGGGACAGACCGGCGAGCCCGGCTTGGGCGCGCGGGTAACGG
GAAACACCTCGCCACACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAHS
FFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLV
ATAPVMVVGPRKVSEHIPESLANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL
AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIGVGTTTYSSTAQHSAVAA
EPPS

Sequences:

>Translated_324_residues
MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAHS
FFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLV
ATAPVMVVGPRKVSEHIPESLANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL
AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIGVGTTTYSSTAQHSAVAA
EPPS
>Mature_323_residues
SDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDTLPAIEKSALSTAHSF
FSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVA
TAPVMVVGPRKVSEHIPESLANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLA
WITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKARIGVGTTTYSSTAQHSAVAAE
PPS

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 35047; Mature: 34916

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS
HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCHH
AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH
LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RIGVGTTTYSSTAQHSAVAAEPPS
HHCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
SDQVPKPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAP
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LFGPDTLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSS
HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCHH
AISAFVDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSEHIPES
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH
LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQEEWPAPATHAHRLGNWLKA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RIGVGTTTYSSTAQHSAVAAEPPS
HHCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]