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The map label for this gene is ydaO [H]

Identifier: 148823880

GI number: 148823880

Start: 3019191

End: 3021164

Strand: Reverse

Name: ydaO [H]

Synonym: TBFG_12705

Alternate gene names: 148823880

Gene position: 3021164-3019191 (Counterclockwise)

Preceding gene: 148823883

Following gene: 148823879

Centisome position: 68.28

GC content: 63.58

Gene sequence:

>1974_bases
GTGTCCAAACTTTCAACCGCGGCGCGTCGGTTGCTGATCGGCCGGCCGTTTCGCAGTGACCGGCTCAGTCACACCTTGTT
GCCCAAGCGGATCGCCTTGCCGGTGTTCGCCTCGGATGCGATGTCGTCGATAGCCTACGCCCCCGAGGAGATATTTCTGG
TGCTCTCGGTGGCCGGCCTGGCGGCCTATTCGATGGCGCCGTTGATCGGCCTGGCGGTCGCCGCGGTTCTGCTCGTGGTG
GTGTCTAGTTACCGGCAGAACGTGCACGCTTACCCCTCCGGTGGGGGCGACTACGAGGTTGTCACCACCAACCTGGGTGC
TACCGGCGGTCTCGTGGTTGCCAGCGCCCTGATGGTGGATTACGTTCTCACCGTTGCTGTTTCGATATCGTCGGCGGCGT
CCAACATCGGCTCTGTGAGCCCGTTCGTGTACGAGCACAAGGTGTTGTTTGCCGTCGGCGCGATCGTGCTGATCATGGCG
ATGAACTTGCGTGGGGTTCGGGAATCCGGGTTGGCGTTCGCGATCCCGACCTATGCGTTCATCGCCGGAATCGGCACCAT
GCTCGTGTGGGGGTTGTTCCGGATTTTCGTGCTGGGCAATCCGGTTCGGGCCGAGTCCGCGGCTTTTGAAATGCACGCAG
AGCACGGCCAGATCGTCGGTTTCGCGCTGGTGTTCTTGGTGGCGCGCTCGTTTTCGTCGGGGTGTGCGGCGCTGACGGGT
GTCGAGGCGATCAGCAACGGGGTGCCGGCGTTTCAAAAGCCCAAGTCGCGTAACGCGGCAACCACGCTGCTGATGCTGGG
CATCATTGCGGTGAGCATGTTTATGGGCATGATCGTGCTGGCCGTAGAGACCGGGGTCCAGGTCGTCGACGATCCGGACA
CCCAGCTGACGGGCGCCCCGCCGGGTTATCAGCAAAAGACGCTGGTCGCACAACTGGCGCAGGCCGTGTTCGGGGGCTTT
TACCTGGGGTTCTTGCTGATCGCCGCGGTGACAGCGCTGATCCTGGTGTTGGCCGCTAACACCGCCTTCAACGGCTTCCC
GGTGCTGGGCTCGGTGCTGGCGCAGCACAGCTATCTGCCGCGCCAGTTGCACACCCGTGGGGACCGGCTGGCGTTCTCCA
ACGGAATCCTGTTCCTGGCGGCGGCGGCGATCGGGGCGGTGGTCGCGTTTCGTGCCGAGTTGACCGCGCTGATCCAGCTG
TACATCGTCGGTGTGTTCATCTCGTTCACCATGAGTCAGGTCGGCATGGTCCGGCACTGGACCCGGTTGCTGAGCGCCGA
GACCGATCCGCGCGCCCGTCGCGCGATGCTGCGCTCCCGCGCGGTTAACACGGTCGGCTTCGTGTCCACCGGTACCGTCC
TGCTCATCGCGCTGGTAACGAAATTCCTTGCCGGAGCATGGATCGCGATCGTCGCCATGGGAGGGTTCTTCATGATGATG
AAGCTCATCCACAGGCACTATGACGCCGTCAACCGGGAGTTGGCGGAACAGGCCGAGGAAGCCGAGATAACGTTGCCCAG
CCGCAATCACGCCGTCGTGCTGGTGTCGAAGCTGCACCTGCCGACGTTGCGCGCGTTGACCTACGCACGAGCGACCCGGC
CCGACGTGTTGGAAGCCGTGACGGTCAACGTCGACGATGCGGAAACCCGCGAGCTGGTGCGCCAGTGGCAGGACAGCGAT
GTGAGCGTGCCACTCAAGGTCATCGCCTCGCCGTACCGTGAGATCACCCGGCCGGTGCTCGATTACGTCAAGCGGGTCAG
CAAGGAATCGCCACGGACCGTGGTGACGGTATTCATTCCGGAGTATGTCGTGGGGCGCTGGTGGGAACAGCTGCTGCACA
ACCAGAGTGCGCTGCGGCTCAAGGGCCGGTTGCTGTTCATGCCCGGCGTGATGGTGACTTCGGTGCCTTGGCAACTGACG
TCGTCGGAGCGGATCAAGACGTTACAGCCGCACGCGGCTCCCGGTGACACGTGA

Upstream 100 bases:

>100_bases
CGCGATCGGCAACCCGCGGTGGCCAGCCGATTTACGTCGGCGAACATTCTCGTCTAGGGAACGCTACCGCCACGCTCGGA
TAGGCCTACCCTTGGCTCTC

Downstream 100 bases:

>100_bases
CGGGGCATCTTCGATTGACCCGCGCCGGCGACGATGCAGAGCAAAGCGATGGGGAGGAGCGGCGCCAGTGACCCGCGCCG
GCGACGATGCAGAGCAAAGC

Product: alanine, valine and leucine rich integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MSKLSTAARRLLIGRPFRSDRLSHTLLPKRIALPVFASDAMSSIAYAPEEIFLVLSVAGLAAYSMAPLIGLAVAAVLLVV
VSSYRQNVHAYPSGGGDYEVVTTNLGATGGLVVASALMVDYVLTVAVSISSAASNIGSVSPFVYEHKVLFAVGAIVLIMA
MNLRGVRESGLAFAIPTYAFIAGIGTMLVWGLFRIFVLGNPVRAESAAFEMHAEHGQIVGFALVFLVARSFSSGCAALTG
VEAISNGVPAFQKPKSRNAATTLLMLGIIAVSMFMGMIVLAVETGVQVVDDPDTQLTGAPPGYQQKTLVAQLAQAVFGGF
YLGFLLIAAVTALILVLAANTAFNGFPVLGSVLAQHSYLPRQLHTRGDRLAFSNGILFLAAAAIGAVVAFRAELTALIQL
YIVGVFISFTMSQVGMVRHWTRLLSAETDPRARRAMLRSRAVNTVGFVSTGTVLLIALVTKFLAGAWIAIVAMGGFFMMM
KLIHRHYDAVNRELAEQAEEAEITLPSRNHAVVLVSKLHLPTLRALTYARATRPDVLEAVTVNVDDAETRELVRQWQDSD
VSVPLKVIASPYREITRPVLDYVKRVSKESPRTVVTVFIPEYVVGRWWEQLLHNQSALRLKGRLLFMPGVMVTSVPWQLT
SSERIKTLQPHAAPGDT

Sequences:

>Translated_657_residues
MSKLSTAARRLLIGRPFRSDRLSHTLLPKRIALPVFASDAMSSIAYAPEEIFLVLSVAGLAAYSMAPLIGLAVAAVLLVV
VSSYRQNVHAYPSGGGDYEVVTTNLGATGGLVVASALMVDYVLTVAVSISSAASNIGSVSPFVYEHKVLFAVGAIVLIMA
MNLRGVRESGLAFAIPTYAFIAGIGTMLVWGLFRIFVLGNPVRAESAAFEMHAEHGQIVGFALVFLVARSFSSGCAALTG
VEAISNGVPAFQKPKSRNAATTLLMLGIIAVSMFMGMIVLAVETGVQVVDDPDTQLTGAPPGYQQKTLVAQLAQAVFGGF
YLGFLLIAAVTALILVLAANTAFNGFPVLGSVLAQHSYLPRQLHTRGDRLAFSNGILFLAAAAIGAVVAFRAELTALIQL
YIVGVFISFTMSQVGMVRHWTRLLSAETDPRARRAMLRSRAVNTVGFVSTGTVLLIALVTKFLAGAWIAIVAMGGFFMMM
KLIHRHYDAVNRELAEQAEEAEITLPSRNHAVVLVSKLHLPTLRALTYARATRPDVLEAVTVNVDDAETRELVRQWQDSD
VSVPLKVIASPYREITRPVLDYVKRVSKESPRTVVTVFIPEYVVGRWWEQLLHNQSALRLKGRLLFMPGVMVTSVPWQLT
SSERIKTLQPHAAPGDT
>Mature_656_residues
SKLSTAARRLLIGRPFRSDRLSHTLLPKRIALPVFASDAMSSIAYAPEEIFLVLSVAGLAAYSMAPLIGLAVAAVLLVVV
SSYRQNVHAYPSGGGDYEVVTTNLGATGGLVVASALMVDYVLTVAVSISSAASNIGSVSPFVYEHKVLFAVGAIVLIMAM
NLRGVRESGLAFAIPTYAFIAGIGTMLVWGLFRIFVLGNPVRAESAAFEMHAEHGQIVGFALVFLVARSFSSGCAALTGV
EAISNGVPAFQKPKSRNAATTLLMLGIIAVSMFMGMIVLAVETGVQVVDDPDTQLTGAPPGYQQKTLVAQLAQAVFGGFY
LGFLLIAAVTALILVLAANTAFNGFPVLGSVLAQHSYLPRQLHTRGDRLAFSNGILFLAAAAIGAVVAFRAELTALIQLY
IVGVFISFTMSQVGMVRHWTRLLSAETDPRARRAMLRSRAVNTVGFVSTGTVLLIALVTKFLAGAWIAIVAMGGFFMMMK
LIHRHYDAVNRELAEQAEEAEITLPSRNHAVVLVSKLHLPTLRALTYARATRPDVLEAVTVNVDDAETRELVRQWQDSDV
SVPLKVIASPYREITRPVLDYVKRVSKESPRTVVTVFIPEYVVGRWWEQLLHNQSALRLKGRLLFMPGVMVTSVPWQLTS
SERIKTLQPHAAPGDT

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70775; Mature: 70644

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLSTAARRLLIGRPFRSDRLSHTLLPKRIALPVFASDAMSSIAYAPEEIFLVLSVAGL
CCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AAYSMAPLIGLAVAAVLLVVVSSYRQNVHAYPSGGGDYEVVTTNLGATGGLVVASALMVD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
YVLTVAVSISSAASNIGSVSPFVYEHKVLFAVGAIVLIMAMNLRGVRESGLAFAIPTYAF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
IAGIGTMLVWGLFRIFVLGNPVRAESAAFEMHAEHGQIVGFALVFLVARSFSSGCAALTG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
VEAISNGVPAFQKPKSRNAATTLLMLGIIAVSMFMGMIVLAVETGVQVVDDPDTQLTGAP
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
PGYQQKTLVAQLAQAVFGGFYLGFLLIAAVTALILVLAANTAFNGFPVLGSVLAQHSYLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
RQLHTRGDRLAFSNGILFLAAAAIGAVVAFRAELTALIQLYIVGVFISFTMSQVGMVRHW
HHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRLLSAETDPRARRAMLRSRAVNTVGFVSTGTVLLIALVTKFLAGAWIAIVAMGGFFMMM
HHHHCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLIHRHYDAVNRELAEQAEEAEITLPSRNHAVVLVSKLHLPTLRALTYARATRPDVLEAV
HHHHHHHHHHHHHHHHHHHHCEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHEE
TVNVDDAETRELVRQWQDSDVSVPLKVIASPYREITRPVLDYVKRVSKESPRTVVTVFIP
EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECH
EYVVGRWWEQLLHNQSALRLKGRLLFMPGVMVTSVPWQLTSSERIKTLQPHAAPGDT
HHHHHHHHHHHHCCCHHHEECCEEEEECCHHHHCCCCCCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
SKLSTAARRLLIGRPFRSDRLSHTLLPKRIALPVFASDAMSSIAYAPEEIFLVLSVAGL
CCHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH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HHHHHHHHHHHHCCCHHHEECCEEEEECCHHHHCCCCCCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]