| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823862
Identifier: 148823862
GI number: 148823862
Start: 2999650
End: 3001227
Strand: Direct
Name: 148823862
Synonym: TBFG_12687
Alternate gene names: NA
Gene position: 2999650-3001227 (Clockwise)
Preceding gene: 148823860
Following gene: 148823863
Centisome position: 67.8
GC content: 68.06
Gene sequence:
>1578_bases GTGGTCGGCATGAGTCGGCCCATGACGTCAACCGCGATGTTGGTCGCGCTGACCTGCTCGGCGACAGTGCTGGCCGCATG CGTCCCGGCGTTCGGCGCCGACCCGCGGTTCGCGACCTACTCGGGCGCAGGACCGCAAGGCGCAGCCACCACGACACCAC CGCCGGCTGGCCCACCACCGCTCGCCGCACCCAAGAACGACTTGTCGTGGCACGACTGCACGTCACGGGTGTACTCGAAT GCTGGGATCCCAGCAGCGCCCGGCGTCAAGCTGGAATGCGCAAGCTATGACACCGACCTCGACCCGCTCGTCGGCGGGTC CACAGCGGTAAGCATCGGCGTAGTGCGCGCGCGCTCCAACCAGACCCCGAGCGACGCAGGACCCCTGGTGTTCACCACCG GCTCCGACCTACCCTCGTCGACGCAGTTGCCGGTCTGGCTGGCACACGCGGGCATCGATGTGCTCCGCAGCCACCCCATT GTCGCCGTCGACCGCCGCGGCATGGGCATGTCGAGCCCAATCGACTGCCGCGATCACTTTGACCGCGACGAGATGCGTGA TCAGGCGCAATTCCAGGCTGGCGACGATCCGGTGGCCAACCTTTCCGACATCTCCAACACCGCCACCACCGACTGCACCG ACGCCATCGCGCCAGGCGAGTCCGCCTACGACAACACCCACGCCGCCTCGGATATCGAGCGCTTACGCAAACTCTGGGAC GTCCCTGCCCTCGCCTTCGTCGGCATTGGCAACGGCACCCAAGTGGCGCTGGCCTACGCAGCATCGCGTCCCGACAACGT CGCCAGACTGATCCTCGACTCCCCAATCGCGTTGGGGGTCTCTGCCGAAGCCGCCGCCGAGCAACAGGTCCAGGGCCAAC AGGCGGCGCTGGACGCATTCGCTGCGCAATGTGTCGCGGTGAACTGCGCGCTGGGCTCCCATCCGAAAGGCGCGGTCAGC GCGCTGCTGTCGGCCGCCCGGTCCGGTGATGGGCCCGGCGGCGCGTCGGTGGCGGCTGTCGCCAACGCCGTCGCCACCGC GTTGGGCTTCCCCGACAGTGGCCGGGTCGATAGCACCACGAAATTGGCCGACGCGCTGGCCGCGGCCCGCTCCGGGGACA TGAACTTGCTGTCCGCCCTGATCAACCGCGCCGATACCACCCGGGATACGGACGGTCAGTTCATCAGCTCGTGCAGCGAT GCGGTCAACCGCCCGACACCGGACCGGGTGCGCGAGCTGGTGGTGGCTTGGGGGAAGCTCTACCCGCAGTTCGGCGCCGT CGCGGCGCTCAACCTGGTGAAATGCGTGCACTGGCCCAGCAGTTCGCCGCCGCAGCCACCGAAAGACCTCAAGGTCGACG TGCTGTTGCTCGGTGTGCAAAACGACCCGATCGTGGGCAACGAAGGGGTCGCCGCGACCGCCGCCACGGCCATCAACGCC AACGCCGCCAGCAAGCGGGTGATGTGGCAAGGTATTGGCCACGGCGCCAGCATCTACTCGTCCTGCGCGGTGCCGCCACT CGTCGCCTACCTGGACACTGGCAAGCTGCCTGACACCGACACCTATTGCCCCGCCTGA
Upstream 100 bases:
>100_bases GTACACCCGCTACGTCAAGACCTGAAACAGCTGGACGTGAATGCCCGCCTCCTCACCGACCCACTACGCGGCCCGCATCG TCGCCGGGTGAATGGCTACT
Downstream 100 bases:
>100_bases TATTCGGGGCGGGCGGGACGCGGTGTACGGTGCGCTGGTGACGGCAGCTGACTCCATCCGAACCGGCCTAGGCGCATCCT TGTTGGCCGGATTCCGTCCG
Product: protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MVGMSRPMTSTAMLVALTCSATVLAACVPAFGADPRFATYSGAGPQGAATTTPPPAGPPPLAAPKNDLSWHDCTSRVYSN AGIPAAPGVKLECASYDTDLDPLVGGSTAVSIGVVRARSNQTPSDAGPLVFTTGSDLPSSTQLPVWLAHAGIDVLRSHPI VAVDRRGMGMSSPIDCRDHFDRDEMRDQAQFQAGDDPVANLSDISNTATTDCTDAIAPGESAYDNTHAASDIERLRKLWD VPALAFVGIGNGTQVALAYAASRPDNVARLILDSPIALGVSAEAAAEQQVQGQQAALDAFAAQCVAVNCALGSHPKGAVS ALLSAARSGDGPGGASVAAVANAVATALGFPDSGRVDSTTKLADALAAARSGDMNLLSALINRADTTRDTDGQFISSCSD AVNRPTPDRVRELVVAWGKLYPQFGAVAALNLVKCVHWPSSSPPQPPKDLKVDVLLLGVQNDPIVGNEGVAATAATAINA NAASKRVMWQGIGHGASIYSSCAVPPLVAYLDTGKLPDTDTYCPA
Sequences:
>Translated_525_residues MVGMSRPMTSTAMLVALTCSATVLAACVPAFGADPRFATYSGAGPQGAATTTPPPAGPPPLAAPKNDLSWHDCTSRVYSN AGIPAAPGVKLECASYDTDLDPLVGGSTAVSIGVVRARSNQTPSDAGPLVFTTGSDLPSSTQLPVWLAHAGIDVLRSHPI VAVDRRGMGMSSPIDCRDHFDRDEMRDQAQFQAGDDPVANLSDISNTATTDCTDAIAPGESAYDNTHAASDIERLRKLWD VPALAFVGIGNGTQVALAYAASRPDNVARLILDSPIALGVSAEAAAEQQVQGQQAALDAFAAQCVAVNCALGSHPKGAVS ALLSAARSGDGPGGASVAAVANAVATALGFPDSGRVDSTTKLADALAAARSGDMNLLSALINRADTTRDTDGQFISSCSD AVNRPTPDRVRELVVAWGKLYPQFGAVAALNLVKCVHWPSSSPPQPPKDLKVDVLLLGVQNDPIVGNEGVAATAATAINA NAASKRVMWQGIGHGASIYSSCAVPPLVAYLDTGKLPDTDTYCPA >Mature_525_residues MVGMSRPMTSTAMLVALTCSATVLAACVPAFGADPRFATYSGAGPQGAATTTPPPAGPPPLAAPKNDLSWHDCTSRVYSN AGIPAAPGVKLECASYDTDLDPLVGGSTAVSIGVVRARSNQTPSDAGPLVFTTGSDLPSSTQLPVWLAHAGIDVLRSHPI VAVDRRGMGMSSPIDCRDHFDRDEMRDQAQFQAGDDPVANLSDISNTATTDCTDAIAPGESAYDNTHAASDIERLRKLWD VPALAFVGIGNGTQVALAYAASRPDNVARLILDSPIALGVSAEAAAEQQVQGQQAALDAFAAQCVAVNCALGSHPKGAVS ALLSAARSGDGPGGASVAAVANAVATALGFPDSGRVDSTTKLADALAAARSGDMNLLSALINRADTTRDTDGQFISSCSD AVNRPTPDRVRELVVAWGKLYPQFGAVAALNLVKCVHWPSSSPPQPPKDLKVDVLLLGVQNDPIVGNEGVAATAATAINA NAASKRVMWQGIGHGASIYSSCAVPPLVAYLDTGKLPDTDTYCPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR013595 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]
EC number: NA
Molecular weight: Translated: 53745; Mature: 53745
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGMSRPMTSTAMLVALTCSATVLAACVPAFGADPRFATYSGAGPQGAATTTPPPAGPPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC LAAPKNDLSWHDCTSRVYSNAGIPAAPGVKLECASYDTDLDPLVGGSTAVSIGVVRARSN CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCC QTPSDAGPLVFTTGSDLPSSTQLPVWLAHAGIDVLRSHPIVAVDRRGMGMSSPIDCRDHF CCCCCCCCEEEECCCCCCCCCCCCEEEEHHCHHHHHCCCEEEECCCCCCCCCCCCHHHCC DRDEMRDQAQFQAGDDPVANLSDISNTATTDCTDAIAPGESAYDNTHAASDIERLRKLWD CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHC VPALAFVGIGNGTQVALAYAASRPDNVARLILDSPIALGVSAEAAAEQQVQGQQAALDAF CCCEEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHH AAQCVAVNCALGSHPKGAVSALLSAARSGDGPGGASVAAVANAVATALGFPDSGRVDSTT HHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH KLADALAAARSGDMNLLSALINRADTTRDTDGQFISSCSDAVNRPTPDRVRELVVAWGKL HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YPQFGAVAALNLVKCVHWPSSSPPQPPKDLKVDVLLLGVQNDPIVGNEGVAATAATAINA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCC NAASKRVMWQGIGHGASIYSSCAVPPLVAYLDTGKLPDTDTYCPA CCHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVGMSRPMTSTAMLVALTCSATVLAACVPAFGADPRFATYSGAGPQGAATTTPPPAGPPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCC LAAPKNDLSWHDCTSRVYSNAGIPAAPGVKLECASYDTDLDPLVGGSTAVSIGVVRARSN CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCC QTPSDAGPLVFTTGSDLPSSTQLPVWLAHAGIDVLRSHPIVAVDRRGMGMSSPIDCRDHF CCCCCCCCEEEECCCCCCCCCCCCEEEEHHCHHHHHCCCEEEECCCCCCCCCCCCHHHCC DRDEMRDQAQFQAGDDPVANLSDISNTATTDCTDAIAPGESAYDNTHAASDIERLRKLWD CHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHC VPALAFVGIGNGTQVALAYAASRPDNVARLILDSPIALGVSAEAAAEQQVQGQQAALDAF CCCEEEEECCCCCEEEEEEECCCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHH AAQCVAVNCALGSHPKGAVSALLSAARSGDGPGGASVAAVANAVATALGFPDSGRVDSTT HHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH KLADALAAARSGDMNLLSALINRADTTRDTDGQFISSCSDAVNRPTPDRVRELVVAWGKL HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YPQFGAVAALNLVKCVHWPSSSPPQPPKDLKVDVLLLGVQNDPIVGNEGVAATAATAINA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCC NAASKRVMWQGIGHGASIYSSCAVPPLVAYLDTGKLPDTDTYCPA CCHHHHHHHHCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]