| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823847
Identifier: 148823847
GI number: 148823847
Start: 2990619
End: 2991011
Strand: Reverse
Name: 148823847
Synonym: TBFG_12672
Alternate gene names: NA
Gene position: 2991011-2990619 (Counterclockwise)
Preceding gene: 148823848
Following gene: 148823846
Centisome position: 67.6
GC content: 71.76
Gene sequence:
>393_bases ATGACCGCCGTCGGCGGGTCGCCGCCGACGCGACGATGCCCGGCCACAGAGGACCGGGCACCCGCGACAGTCGCCACACC GTCTAGCACCGATCCTACCGCGTCCCGCGCCGTGTCGTGGTGGTCGGTGCACGAGTATGTCGCACCGACCCTGGCCGCCG CCGTGGAATGGCCGATGGCCGGCACCCCGGCGTGGTGCGACCTCGACGACACCGACCCGGTCAAATGGGCCGCGATCTGC GACGCTGCTCGGCATTGGGCACTCCGGGTGGAGACGTGCCAGGCCGCGTCGGCCGAGGCATCACGTGACGTATCCGCCGC CGCCGACTGGCCGGCGGTCTCTCGGGAGATCCAGCGTCGGCGTGACGCCTACATTCGGCGGGTGGTGGTCTGA
Upstream 100 bases:
>100_bases TCGCCGACGGCCGCCTACGCGGATACCGCTCCGGCACCCGCCTCGTCCGTCTGCGCCGCGATGAGGTCGACGGCGCCATG CACCCGTTCGGTGGTGCCGC
Downstream 100 bases:
>100_bases GATGGCTGACATCCCCTACGGCCGTGACTATCCCGACCCGATCTGGTGTGACGAGGACGGCCAGCCGATGCCGCCGGTCG GCGCCGAATTGCTCGACGAC
Product: phiRv2 prophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTAVGGSPPTRRCPATEDRAPATVATPSSTDPTASRAVSWWSVHEYVAPTLAAAVEWPMAGTPAWCDLDDTDPVKWAAIC DAARHWALRVETCQAASAEASRDVSAAADWPAVSREIQRRRDAYIRRVVV
Sequences:
>Translated_130_residues MTAVGGSPPTRRCPATEDRAPATVATPSSTDPTASRAVSWWSVHEYVAPTLAAAVEWPMAGTPAWCDLDDTDPVKWAAIC DAARHWALRVETCQAASAEASRDVSAAADWPAVSREIQRRRDAYIRRVVV >Mature_129_residues TAVGGSPPTRRCPATEDRAPATVATPSSTDPTASRAVSWWSVHEYVAPTLAAAVEWPMAGTPAWCDLDDTDPVKWAAICD AARHWALRVETCQAASAEASRDVSAAADWPAVSREIQRRRDAYIRRVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1583c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2656_MYCTU (P71953)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: D70966 - RefSeq: NP_217172.1 - RefSeq: NP_337233.1 - EnsemblBacteria: EBMYCT00000002721 - EnsemblBacteria: EBMYCT00000072724 - GeneID: 888179 - GeneID: 925567 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2733 - KEGG: mtu:Rv2656c - TIGR: MT2733 - TubercuList: Rv2656c - GeneTree: EBGT00050000018640 - HOGENOM: HBG564847 - ProtClustDB: CLSK791264
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14047; Mature: 13915
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVGGSPPTRRCPATEDRAPATVATPSSTDPTASRAVSWWSVHEYVAPTLAAAVEWPMA CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GTPAWCDLDDTDPVKWAAICDAARHWALRVETCQAASAEASRDVSAAADWPAVSREIQRR CCCCCCCCCCCCCHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH RDAYIRRVVV HHHHHHHHCC >Mature Secondary Structure TAVGGSPPTRRCPATEDRAPATVATPSSTDPTASRAVSWWSVHEYVAPTLAAAVEWPMA CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GTPAWCDLDDTDPVKWAAICDAARHWALRVETCQAASAEASRDVSAAADWPAVSREIQRR CCCCCCCCCCCCCHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH RDAYIRRVVV HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036