| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148823823
Identifier: 148823823
GI number: 148823823
Start: 2969084
End: 2970208
Strand: Direct
Name: 148823823
Synonym: TBFG_12648
Alternate gene names: NA
Gene position: 2969084-2970208 (Clockwise)
Preceding gene: 148823822
Following gene: 148823824
Centisome position: 67.11
GC content: 64.09
Gene sequence:
>1125_bases ATGCGATCAGAACGTCTCCGGTGGCTGGTAGCCGCAGAAGGTCCGTTCGCCTCGGTGTATTTCGACGACTCGCACGACAC TCTTGATGCCGTCGAGCGCCGGGAAGCGACGTGGCGCGATGTCCGGAAGCATCTCGAAAGCCGCGACGCGAAGCAGGAGC TCATCGACAGCCTCGAAGAGGCGGTGCGGGATTCTCGACCGGCCGTCGGCCAGCGTGGCCGCGCGCTGATCGCGACCGGC GAGCAAGTACTGGTCAACGAGCATCTGATCGGCCCACCACCGGCTACGGTGATTCGGCTGTCGGATTATCCGTACGTCGT GCCATTGATAGACCTTGAGATGCGGCGACCGACGTATGTATTTGCCGCGGTTGATCACACCGGCGCCGACGTCAAGCTGT ATCAGGGGGCCACCATCAGTTCCACGAAAATCGATGGGGTCGGCTACCCGGTGCACAAGCCGGTCACCGCCGGCTGGAAC GGCTACGGCGACTTCCAGCACACCACCGAAGAAGCCATCCGAATGAACTGCCGCGCGGTCGCCGACCATCTCACCCGACT GGTAGACGCTGCCGACCCCGAGGTGGTGTTCGTGTCCGGCGAGGTGCGGTCACGCACAGACCTGCTTTCCACATTGCCGC AGCGGGTGGCGGTCCGGGTGTCGCAGCTGCATGCCGGACCGCGCAAAAGCGCCTTAGACGAGGAAGAGATCTGGGACCTG ACATCCGCGGAGTTCACCCGGCGGCGGTACGCCGAAATCACCAATGTCGCACAACAATTTGAGGCGGAGATCGGACGCGG ATCGGGGCTGGCGGCCCAAGGGTTGGCGGAGGTGTGTGCGGCTCTGCGTGACGGCGACGTCGACACGCTGATCGTCGGAG AGCTAGGCGAGGCCACCGTGGTCACCGGTAAAGCGCGTACTACGGTCGCGCGGGATGCCGACATGTTGTCCGAACTCGGC GAACCGGTAGATCGCGTGGCAAGGGCCGATGAGGCGTTGCCATTCGCCGCGATCGCGGTAGGTGCCGCATTGGTCCGTGA CGACAACCGGATCGCGCCACTAGATGGGGTGGGCGCATTGCTGCGTTATGCCGCCACCAACCGACTCGGCAGCCATAGAT CCTAG
Upstream 100 bases:
>100_bases TCTCGACAGCGAAGAGATCACCGGTTGATCCACCAAGCATGCATTGGCGGGCATCTGCATAAACGGTGACGTATCAGCAC AAAACAGCGGAGAGAACAAC
Downstream 100 bases:
>100_bases GATGCTGCACCGCGACGATCACATCAATCCGCCGCGGCCCCGCGGGTTGGATGTTCCTTGCGCCCGCCTACGAGCGACAA ATCCCCTGCGCGCCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRSERLRWLVAAEGPFASVYFDDSHDTLDAVERREATWRDVRKHLESRDAKQELIDSLEEAVRDSRPAVGQRGRALIATG EQVLVNEHLIGPPPATVIRLSDYPYVVPLIDLEMRRPTYVFAAVDHTGADVKLYQGATISSTKIDGVGYPVHKPVTAGWN GYGDFQHTTEEAIRMNCRAVADHLTRLVDAADPEVVFVSGEVRSRTDLLSTLPQRVAVRVSQLHAGPRKSALDEEEIWDL TSAEFTRRRYAEITNVAQQFEAEIGRGSGLAAQGLAEVCAALRDGDVDTLIVGELGEATVVTGKARTTVARDADMLSELG EPVDRVARADEALPFAAIAVGAALVRDDNRIAPLDGVGALLRYAATNRLGSHRS
Sequences:
>Translated_374_residues MRSERLRWLVAAEGPFASVYFDDSHDTLDAVERREATWRDVRKHLESRDAKQELIDSLEEAVRDSRPAVGQRGRALIATG EQVLVNEHLIGPPPATVIRLSDYPYVVPLIDLEMRRPTYVFAAVDHTGADVKLYQGATISSTKIDGVGYPVHKPVTAGWN GYGDFQHTTEEAIRMNCRAVADHLTRLVDAADPEVVFVSGEVRSRTDLLSTLPQRVAVRVSQLHAGPRKSALDEEEIWDL TSAEFTRRRYAEITNVAQQFEAEIGRGSGLAAQGLAEVCAALRDGDVDTLIVGELGEATVVTGKARTTVARDADMLSELG EPVDRVARADEALPFAAIAVGAALVRDDNRIAPLDGVGALLRYAATNRLGSHRS >Mature_374_residues MRSERLRWLVAAEGPFASVYFDDSHDTLDAVERREATWRDVRKHLESRDAKQELIDSLEEAVRDSRPAVGQRGRALIATG EQVLVNEHLIGPPPATVIRLSDYPYVVPLIDLEMRRPTYVFAAVDHTGADVKLYQGATISSTKIDGVGYPVHKPVTAGWN GYGDFQHTTEEAIRMNCRAVADHLTRLVDAADPEVVFVSGEVRSRTDLLSTLPQRVAVRVSQLHAGPRKSALDEEEIWDL TSAEFTRRRYAEITNVAQQFEAEIGRGSGLAAQGLAEVCAALRDGDVDTLIVGELGEATVVTGKARTTVARDADMLSELG EPVDRVARADEALPFAAIAVGAALVRDDNRIAPLDGVGALLRYAATNRLGSHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2629_MYCTU (O06183)
Other databases:
- EMBL: AE000516 - EMBL: BX842580 - PIR: D70573 - RefSeq: NP_217145.1 - RefSeq: NP_337206.1 - ProteinModelPortal: O06183 - EnsemblBacteria: EBMYCT00000003598 - EnsemblBacteria: EBMYCT00000069165 - GeneID: 888588 - GeneID: 925599 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2704 - KEGG: mtu:Rv2629 - TIGR: MT2704 - TubercuList: Rv2629 - GeneTree: EBGT00050000017997 - HOGENOM: HBG569172 - OMA: FVSVYFD - ProtClustDB: CLSK872087 - GO: GO:0005829
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40840; Mature: 40840
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSERLRWLVAAEGPFASVYFDDSHDTLDAVERREATWRDVRKHLESRDAKQELIDSLEE CCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVRDSRPAVGQRGRALIATGEQVLVNEHLIGPPPATVIRLSDYPYVVPLIDLEMRRPTYV HHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEE FAAVDHTGADVKLYQGATISSTKIDGVGYPVHKPVTAGWNGYGDFQHTTEEAIRMNCRAV EEEECCCCCCEEEECCCEECCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ADHLTRLVDAADPEVVFVSGEVRSRTDLLSTLPQRVAVRVSQLHAGPRKSALDEEEIWDL HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC TSAEFTRRRYAEITNVAQQFEAEIGRGSGLAAQGLAEVCAALRDGDVDTLIVGELGEATV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEE VTGKARTTVARDADMLSELGEPVDRVARADEALPFAAIAVGAALVRDDNRIAPLDGVGAL EECCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCHHHHHH LRYAATNRLGSHRS HHHHHHHCCCCCCC >Mature Secondary Structure MRSERLRWLVAAEGPFASVYFDDSHDTLDAVERREATWRDVRKHLESRDAKQELIDSLEE CCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVRDSRPAVGQRGRALIATGEQVLVNEHLIGPPPATVIRLSDYPYVVPLIDLEMRRPTYV HHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEE FAAVDHTGADVKLYQGATISSTKIDGVGYPVHKPVTAGWNGYGDFQHTTEEAIRMNCRAV EEEECCCCCCEEEECCCEECCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ADHLTRLVDAADPEVVFVSGEVRSRTDLLSTLPQRVAVRVSQLHAGPRKSALDEEEIWDL HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC TSAEFTRRRYAEITNVAQQFEAEIGRGSGLAAQGLAEVCAALRDGDVDTLIVGELGEATV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEE VTGKARTTVARDADMLSELGEPVDRVARADEALPFAAIAVGAALVRDDNRIAPLDGVGAL EECCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCHHHHHH LRYAATNRLGSHRS HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036