| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823815
Identifier: 148823815
GI number: 148823815
Start: 2961201
End: 2961875
Strand: Reverse
Name: 148823815
Synonym: TBFG_12640
Alternate gene names: NA
Gene position: 2961875-2961201 (Counterclockwise)
Preceding gene: 148823818
Following gene: 148823814
Centisome position: 66.94
GC content: 68.74
Gene sequence:
>675_bases ATGGGGGTGAGTGTCATCATCAGGTCACTGCAAGAGCCGGTGGGGCGCCGTCGTGCGGTGCTGCGGGCATTGTGTGCGTC GCGGGTTCCGATGAGCATCGCCGCGATCGCCGGCAAGTTGGGCGTGCATCCCAACACCGTCCGCTTCCACCTCGATAACC TGGTCGCTGATGGCCAGGTGGAGCGGGTCGAGCCCGGCCGCGGCCGACCGGGGCGCCCGCCGCTGATGTTTCGGGCGGTC CGGCGGACGGATAGCACTGGGACGCGGCGTTACCGGCTGCTTGCCGAGATCCTCGCCAGTGGCCTTGCCGCCGAACGGGA TTCGCGGGCCATGGCGTTGTCCGCGGGCCGGGCGTGGGGGCGCCAGCTCGAAGCGCCGCCGGCCGGTGCCGACACCGAGG AGACGATCGACCACTTGGTCGCGGTGCTTGACGACCTTGGCTTCGCTCCCGAGCGCCGGGCATCCAACGGCAGGCAACAG GTCGGTCTGCGGCACTGTCCGTTTCTGGAACTCGCCGAAACTCAAGCCGGTGTCGTCTGCCCCGTCCACTTAGGGATCAT GCGGGGAGCCTTGCAAACATGGGGGGCGCCAGTCACCGTCGACCGGCTCGACGCGTTCGTCGAACCCGACCTGTGCCTGG CCCACTTCACGCCGCTGGAAGGAGCCATTCGGTGA
Upstream 100 bases:
>100_bases GCATTGCCACGTTTGTTGGCCATAGACCCCACCTCCGCAGGTTTTTACAAGTCCGTTTGTGTAAACTTACTGCATTGCTC AGGCGCAGCCGACGAGCCTT
Downstream 100 bases:
>100_bases GCGCCGGACCGGCGATCGAGGTCGCCGTCGCGTTCGTCTGGCTGGGAATGGTGGTGGCGATCTCGTTTCTGGAAGCTCCG CTGAAGTTCCGGGCGGCAGG
Product: transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; ArsR Family Transcriptional Regulator; Regulatory Protein; Regulatory Protein IclR; Transcriptional Regulator TrmB; SufR Family Transcriptional Regulator
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MGVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRAV RRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQ VGLRHCPFLELAETQAGVVCPVHLGIMRGALQTWGAPVTVDRLDAFVEPDLCLAHFTPLEGAIR
Sequences:
>Translated_224_residues MGVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRAV RRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQ VGLRHCPFLELAETQAGVVCPVHLGIMRGALQTWGAPVTVDRLDAFVEPDLCLAHFTPLEGAIR >Mature_223_residues GVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRAVR RTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQV GLRHCPFLELAETQAGVVCPVHLGIMRGALQTWGAPVTVDRLDAFVEPDLCLAHFTPLEGAIR
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24241; Mature: 24110
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECHHHCCCCC ERVEPGRGRPGRPPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWG EECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVC HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCHHHHHCCCCEEH PVHLGIMRGALQTWGAPVTVDRLDAFVEPDLCLAHFTPLEGAIR HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCC >Mature Secondary Structure GVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECHHHCCCCC ERVEPGRGRPGRPPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWG EECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVC HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCHHHHHCCCCEEH PVHLGIMRGALQTWGAPVTVDRLDAFVEPDLCLAHFTPLEGAIR HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA