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The map label for this gene is 148823724

Identifier: 148823724

GI number: 148823724

Start: 2866193

End: 2867584

Strand: Direct

Name: 148823724

Synonym: TBFG_12549

Alternate gene names: NA

Gene position: 2866193-2867584 (Clockwise)

Preceding gene: 148823722

Following gene: 148823731

Centisome position: 64.78

GC content: 69.9

Gene sequence:

>1392_bases
GTGCACCTCGCGCACCGGGTCGCCAGCAGCCGCGACACGCCGTCGTCCAGTGCCACACCGAATGCGGTGTCGGGCTCGGC
GTCAAACGCTGCCGATCGGCCTTGCCTCGTCAGGCCGCCGACAGCACCGCCCTGGGCTCACGGTCCGCGGCTCCGCCGGG
ATCCGACCGGCGGCGGCTCAACCCCCTCGATCGTCTTGAGCCGGTCGACAGACCGATCGAAAGACGGCCACCGGATCGTC
CCGGCAGGGGCGAGGAAGTCCGGCGTCCGAGCAAGCACCGGGCGATTGCCCTCAACGCGGAAGACAACCCGATCACCCGA
TTGCAGGCCGAGCGCGTCGCGCACCGCTTTCGGAACCGTCACCTGCCCCTTCGACGTGACGATGGGTTCGTCGGAGTGCC
TGCTTCACCGTTGCCGTACGCCGCCCGTACCCTCACACTCTGTGGAGCTGCTCGTCGCCGCCAACCCCGCTGAAGACTCG
CGCCTGCCCTACCTGATCCGGCTGCCGGTGGGCGCGGGACTGGTCTTCGCCACCTCAGACGTGTGGCCGCGCACCAAGGC
GCTGTATTGCCATCGCCTCGACATCGCCGACTGGCCCGCCGACCCCGTCGTCGTCGACCGGGTCGAGCTACGCAGCTGCA
GCCGCCGGGGCGCGGCCATCGACGTCGTCGCCGCCCGCGCGCGGGAGAACCGATCGCAACTGGTGCACACCATGGCGCGC
GGCCGCCAGGTGGTGTTCTGGCAGAGCCCCAAAACGCGCAAACAGTCGCGGCCGGGCGTGCGCACCCCCACCGCCCGCGC
CGCCGGCATCCCCGAGCTGCACATCGTCGTCGACGCCCACGAACGCTACCCCTACACCTTTGCCGACAAACCCGCGAAGA
CGACGCGGGAAGCCCTGCCCTGCGGCGACTACGGCCTGAAAGTGGCCGGCCAACTCGTGGCGGCCGTCGAGCGTAAAGCG
TTGGCGGACCTTACTTCTGGCGTGCTGAACGGCAACCTGAAATACCAACTGACCGAACTGGCCGCGCTGCCACGGGCCGC
CGTGGTGGTCGAGGACCGCTACTCGGAGATCTTCGCGCACTCCTTCGCCCGCCCGACGGCGATCGCCGATGGGCTGGCCG
AATTGCAGATCGGCTTTCCCAACGTGCCGATCGTGTTCTGCCAAACCCGCAAGCTCGCCCAGGAATACACCTACCGCTAT
CTAGCCGCCGCCCTCACCTGGTTCGTCGACGATGCCGACGCCACCACGGTTTTCGAGCCGGCTGCCGCCGAGCCCGAGCC
CAGCAGCGCCGAGCTGCGCGCGTGGGCCAAAAGCGTCGGCCTGCCGGTGTCCGACCGGGGGCGCCTGCGCCCGCAGATCC
TGCAGGCCTGGCGAGCCGCCCATCCCCGGTGA

Upstream 100 bases:

>100_bases
CTTCCTCATCTGCCCCACGTGTACCCGGTCCCGCCGACCTAAAAGGTCGGCATATCCCTGCCATGCCGGGACGCGTGAGG
CGGGTGAGACACAAGGGAAC

Downstream 100 bases:

>100_bases
CTACAACACCTCGACGAGGCCTGCGGATGCTGAATCGGCCAGTGCGGCATCGAATGTGACCAACCGGCCCCCGTAGCGCG
CGGCCAAGGCGATGAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: ERCC4 Domain Protein

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MHLAHRVASSRDTPSSSATPNAVSGSASNAADRPCLVRPPTAPPWAHGPRLRRDPTGGGSTPSIVLSRSTDRSKDGHRIV
PAGARKSGVRASTGRLPSTRKTTRSPDCRPSASRTAFGTVTCPFDVTMGSSECLLHRCRTPPVPSHSVELLVAANPAEDS
RLPYLIRLPVGAGLVFATSDVWPRTKALYCHRLDIADWPADPVVVDRVELRSCSRRGAAIDVVAARARENRSQLVHTMAR
GRQVVFWQSPKTRKQSRPGVRTPTARAAGIPELHIVVDAHERYPYTFADKPAKTTREALPCGDYGLKVAGQLVAAVERKA
LADLTSGVLNGNLKYQLTELAALPRAAVVVEDRYSEIFAHSFARPTAIADGLAELQIGFPNVPIVFCQTRKLAQEYTYRY
LAAALTWFVDDADATTVFEPAAAEPEPSSAELRAWAKSVGLPVSDRGRLRPQILQAWRAAHPR

Sequences:

>Translated_463_residues
MHLAHRVASSRDTPSSSATPNAVSGSASNAADRPCLVRPPTAPPWAHGPRLRRDPTGGGSTPSIVLSRSTDRSKDGHRIV
PAGARKSGVRASTGRLPSTRKTTRSPDCRPSASRTAFGTVTCPFDVTMGSSECLLHRCRTPPVPSHSVELLVAANPAEDS
RLPYLIRLPVGAGLVFATSDVWPRTKALYCHRLDIADWPADPVVVDRVELRSCSRRGAAIDVVAARARENRSQLVHTMAR
GRQVVFWQSPKTRKQSRPGVRTPTARAAGIPELHIVVDAHERYPYTFADKPAKTTREALPCGDYGLKVAGQLVAAVERKA
LADLTSGVLNGNLKYQLTELAALPRAAVVVEDRYSEIFAHSFARPTAIADGLAELQIGFPNVPIVFCQTRKLAQEYTYRY
LAAALTWFVDDADATTVFEPAAAEPEPSSAELRAWAKSVGLPVSDRGRLRPQILQAWRAAHPR
>Mature_463_residues
MHLAHRVASSRDTPSSSATPNAVSGSASNAADRPCLVRPPTAPPWAHGPRLRRDPTGGGSTPSIVLSRSTDRSKDGHRIV
PAGARKSGVRASTGRLPSTRKTTRSPDCRPSASRTAFGTVTCPFDVTMGSSECLLHRCRTPPVPSHSVELLVAANPAEDS
RLPYLIRLPVGAGLVFATSDVWPRTKALYCHRLDIADWPADPVVVDRVELRSCSRRGAAIDVVAARARENRSQLVHTMAR
GRQVVFWQSPKTRKQSRPGVRTPTARAAGIPELHIVVDAHERYPYTFADKPAKTTREALPCGDYGLKVAGQLVAAVERKA
LADLTSGVLNGNLKYQLTELAALPRAAVVVEDRYSEIFAHSFARPTAIADGLAELQIGFPNVPIVFCQTRKLAQEYTYRY
LAAALTWFVDDADATTVFEPAAAEPEPSSAELRAWAKSVGLPVSDRGRLRPQILQAWRAAHPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50192; Mature: 50192

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLAHRVASSRDTPSSSATPNAVSGSASNAADRPCLVRPPTAPPWAHGPRLRRDPTGGGS
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
TPSIVLSRSTDRSKDGHRIVPAGARKSGVRASTGRLPSTRKTTRSPDCRPSASRTAFGTV
CCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
TCPFDVTMGSSECLLHRCRTPPVPSHSVELLVAANPAEDSRLPYLIRLPVGAGLVFATSD
ECCEEEECCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECC
VWPRTKALYCHRLDIADWPADPVVVDRVELRSCSRRGAAIDVVAARARENRSQLVHTMAR
CCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHC
GRQVVFWQSPKTRKQSRPGVRTPTARAAGIPELHIVVDAHERYPYTFADKPAKTTREALP
CCEEEEECCCCCHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC
CGDYGLKVAGQLVAAVERKALADLTSGVLNGNLKYQLTELAALPRAAVVVEDRYSEIFAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCEEEEEHHHHHHHHHH
SFARPTAIADGLAELQIGFPNVPIVFCQTRKLAQEYTYRYLAAALTWFVDDADATTVFEP
HHCCCHHHHCCHHHEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
AAAEPEPSSAELRAWAKSVGLPVSDRGRLRPQILQAWRAAHPR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MHLAHRVASSRDTPSSSATPNAVSGSASNAADRPCLVRPPTAPPWAHGPRLRRDPTGGGS
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
TPSIVLSRSTDRSKDGHRIVPAGARKSGVRASTGRLPSTRKTTRSPDCRPSASRTAFGTV
CCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
TCPFDVTMGSSECLLHRCRTPPVPSHSVELLVAANPAEDSRLPYLIRLPVGAGLVFATSD
ECCEEEECCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECC
VWPRTKALYCHRLDIADWPADPVVVDRVELRSCSRRGAAIDVVAARARENRSQLVHTMAR
CCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHC
GRQVVFWQSPKTRKQSRPGVRTPTARAAGIPELHIVVDAHERYPYTFADKPAKTTREALP
CCEEEEECCCCCHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC
CGDYGLKVAGQLVAAVERKALADLTSGVLNGNLKYQLTELAALPRAAVVVEDRYSEIFAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCEEEEEHHHHHHHHHH
SFARPTAIADGLAELQIGFPNVPIVFCQTRKLAQEYTYRYLAAALTWFVDDADATTVFEP
HHCCCHHHHCCHHHEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
AAAEPEPSSAELRAWAKSVGLPVSDRGRLRPQILQAWRAAHPR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA