Click here to switch to the map view.

The map label for this gene is ynaI [C]

Identifier: 148823636

GI number: 148823636

Start: 2743789

End: 2745234

Strand: Reverse

Name: ynaI [C]

Synonym: TBFG_12461

Alternate gene names: 148823636

Gene position: 2745234-2743789 (Counterclockwise)

Preceding gene: 148823637

Following gene: 148823635

Centisome position: 62.05

GC content: 63.35

Gene sequence:

>1446_bases
ATGAACCTGCTCGACTCGACATGGTTCTACTGGGCCGTTGGCATTGCGATCGGATTGCCGGCCGGGCTAATCGTTCTCAC
CGAACTGCACAACATACTCGTCCGACGGAACAGCCATCTGGCCAGGCAGGCAAGTCTGCTGCGAAACTACCTGCTACCCC
TGGGCGCGGTTTTGCTGCTGCTTGTCAAGGCATCTGAAGTCCCGGCCGAGGACCCCACCGTGCGGGTGCTCACGACAGCG
TTCGGATTTCTGGTGCTGGTGCTGCTGCTGTCGTTACTGAATGCCACCCTGTTTCAGGGTGCGCCCCAACAGAGCTGGCG
CAAGCGGCTACCCGCCATCTTCGTCGATGTCGCGCGCTTCGCGCTGATCGGCATAGGTTTGGCGGTGATCCTGTCCTACA
TCTGGGGGGTGCGGGTCGGTGGACTGTTCGCCGCGTTAGGTGTGACGTCAGTCGTCATCGGCCTGATGCTGCAGAACTCC
GTCGGCCAGATCGTGTCGGGCTTGTTCATGCTGTTCGAACAGCCCTTTCGGATCGATGATTGGTTGGAAACACCCACAGC
CCGCGGACGAGTCGTCGAGGTGAACTGGCGGGCTGTCCATATCGACACCGGCAGCGGACTGCAGATCATGCCCAACTCGA
TGTTGGCCACCACCGCGTTTACCAATCTCAGCCGGCCGGCCGGGGCGCACGAATGCTCGATCACGACCACATTTTCCACG
TCCGATCCCCCGGACAAGGTATGCGCCATGCTGAACAGGGCTGCCAGCGCGCTACCGCATGTTAAGCCCGGGGTCGTGCC
CGCCACAATTGCCCGAGGAGCCGCCGAGTATCGAACGACGGTCAGGCTGACATCACCGGCCGACGAAGGCCCAACGCAGG
CAACGTTTCTGCGCTGGGTCTGGTACGCCGCGCGTCGGGAAGGGCTACACCTCGACGAGGCCGACGACGAGTTCTCGACG
GCCGAACGTGTGGAGTCCGCCCTGCGCACGGTGGTGGGGCCCGAGCTGCGACTGAGCTCTAGCGATCAGCAGTCGCTGGC
TCGGTACGCGAGGCTGGTGCGCTACGGCACTGATGAGATCGTGCAGCACGCGGGTGTGGTTCCCATGGGTATCACCTTCG
TGATCGCCGGCAGCGTGCGGCTGACGGTTACGACCGATGACGGATCCGTGGTTGCGATTGCCACCCTCAAAAAGGGCACG
TTTCTGGGCTTGACTGCGCTGACTCGGCAACCCGACCCCGCCGGTGCGGTAGCGCTGGAAGAGGTGACCGCGCTGCAGAT
CGGCCGGGAGCACCTTGAGCAGGTCGTGATGAACAAGCCGATGCTGCTGCAGGAGCTGGGTCGGGTTATCGACGAGCGGC
AAAGGAAGGCGCAACAGGCAATTCGCCGCGACTTGCACCAATCCCCAGCGGCGGCCGGCGAGCATCGTGGGCCTGCGCGA
CGCTGA

Upstream 100 bases:

>100_bases
AGGTGTATGAGGCGATGCGAGACGTGTGGCAGTTCACGGCTGCGGGCACGATTTCTGTCGGAGGGTTAGAAGAGCCGATC
TACCGATTGTCGGAGCGATC

Downstream 100 bases:

>100_bases
CGAGCGGTGGGACACGGTTGGCCAAGCGATCGGTCTGTTTCTGCGCGGCCACACCCTGCGCACCGCAGCTCCGACGGCGC
TGATCGTGGGTACCGTGCTA

Product: transmembrane protein

Products: NA

Alternate protein names: Mechanosensitive Ion Channel Protein; Integral Membrane Protein; Transmembrane Transporter; Transmembrane Protein; Transporter MscS Family; Mechanosensitive Channel Protein; Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel; Conserved Membrane Protein; Transcriptional Regulator Crp/Fnr Family; Potassium Efflux System KEFA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQASLLRNYLLPLGAVLLLLVKASEVPAEDPTVRVLTTA
FGFLVLVLLLSLLNATLFQGAPQQSWRKRLPAIFVDVARFALIGIGLAVILSYIWGVRVGGLFAALGVTSVVIGLMLQNS
VGQIVSGLFMLFEQPFRIDDWLETPTARGRVVEVNWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFST
SDPPDKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQATFLRWVWYAARREGLHLDEADDEFST
AERVESALRTVVGPELRLSSSDQQSLARYARLVRYGTDEIVQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIATLKKGT
FLGLTALTRQPDPAGAVALEEVTALQIGREHLEQVVMNKPMLLQELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPAR
R

Sequences:

>Translated_481_residues
MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQASLLRNYLLPLGAVLLLLVKASEVPAEDPTVRVLTTA
FGFLVLVLLLSLLNATLFQGAPQQSWRKRLPAIFVDVARFALIGIGLAVILSYIWGVRVGGLFAALGVTSVVIGLMLQNS
VGQIVSGLFMLFEQPFRIDDWLETPTARGRVVEVNWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFST
SDPPDKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQATFLRWVWYAARREGLHLDEADDEFST
AERVESALRTVVGPELRLSSSDQQSLARYARLVRYGTDEIVQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIATLKKGT
FLGLTALTRQPDPAGAVALEEVTALQIGREHLEQVVMNKPMLLQELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPAR
R
>Mature_481_residues
MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQASLLRNYLLPLGAVLLLLVKASEVPAEDPTVRVLTTA
FGFLVLVLLLSLLNATLFQGAPQQSWRKRLPAIFVDVARFALIGIGLAVILSYIWGVRVGGLFAALGVTSVVIGLMLQNS
VGQIVSGLFMLFEQPFRIDDWLETPTARGRVVEVNWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFST
SDPPDKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQATFLRWVWYAARREGLHLDEADDEFST
AERVESALRTVVGPELRLSSSDQQSLARYARLVRYGTDEIVQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIATLKKGT
FLGLTALTRQPDPAGAVALEEVTALQIGREHLEQVVMNKPMLLQELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPAR
R

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52273; Mature: 52273

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQASLLRNYLLPLGAVLLL
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LVKASEVPAEDPTVRVLTTAFGFLVLVLLLSLLNATLFQGAPQQSWRKRLPAIFVDVARF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHH
ALIGIGLAVILSYIWGVRVGGLFAALGVTSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WLETPTARGRVVEVNWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFST
HHCCCCCCCEEEEEEEEEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECC
SDPPDKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQATFLRWV
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHEEEEEEECCCCCCCHHHHHHHHH
WYAARREGLHLDEADDEFSTAERVESALRTVVGPELRLSSSDQQSLARYARLVRYGTDEI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
VQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIATLKKGTFLGLTALTRQPDPAGAVALE
HHHCCCCCCCEEEEEECCEEEEEEECCCCEEEEEEECCCCEEEHHHHCCCCCCCCHHHHH
EVTALQIGREHLEQVVMNKPMLLQELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
R
C
>Mature Secondary Structure
MNLLDSTWFYWAVGIAIGLPAGLIVLTELHNILVRRNSHLARQASLLRNYLLPLGAVLLL
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LVKASEVPAEDPTVRVLTTAFGFLVLVLLLSLLNATLFQGAPQQSWRKRLPAIFVDVARF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHH
ALIGIGLAVILSYIWGVRVGGLFAALGVTSVVIGLMLQNSVGQIVSGLFMLFEQPFRIDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WLETPTARGRVVEVNWRAVHIDTGSGLQIMPNSMLATTAFTNLSRPAGAHECSITTTFST
HHCCCCCCCEEEEEEEEEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECC
SDPPDKVCAMLNRAASALPHVKPGVVPATIARGAAEYRTTVRLTSPADEGPTQATFLRWV
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHEEEEEEECCCCCCCHHHHHHHHH
WYAARREGLHLDEADDEFSTAERVESALRTVVGPELRLSSSDQQSLARYARLVRYGTDEI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
VQHAGVVPMGITFVIAGSVRLTVTTDDGSVVAIATLKKGTFLGLTALTRQPDPAGAVALE
HHHCCCCCCCEEEEEECCEEEEEEECCCCEEEEEEECCCCEEEHHHHCCCCCCCCHHHHH
EVTALQIGREHLEQVVMNKPMLLQELGRVIDERQRKAQQAIRRDLHQSPAAAGEHRGPAR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA