Click here to switch to the map view.

The map label for this gene is 148823589

Identifier: 148823589

GI number: 148823589

Start: 2694060

End: 2695313

Strand: Direct

Name: 148823589

Synonym: TBFG_12412

Alternate gene names: NA

Gene position: 2694060-2695313 (Clockwise)

Preceding gene: 148823587

Following gene: 148823594

Centisome position: 60.89

GC content: 61.72

Gene sequence:

>1254_bases
ATGCTGCATGAGTTCTGGGTGAACTTCACTCACAACCTGTTCAAGCCGCTGCTGCTGTTCTTCTATTTCGGGTTCTTGAT
CCCGATCTTCAAGGTGCGATTCGAGTTCCCCTATGTGCTCTACCAGGGCCTAACCCTGTATCTGCTGCTGGCCATCGGTT
GGCACGGCGGCGAAGAACTCGCCAAGATCAAGCCGTCCAACGTCGGCGCCATCGTTGGGTTCATGGTGGTTGGCTTCGCC
TTGAACTTCGTGATCGGCACCTTGGCATACTTCCTGCTGAGCAAGCTGACCGCCATGCGCCGGGTCGACAGGGCGACGGT
CGCCGGCTATTACGGGTCGGACTCGGCAGGGACATTTGCCACCTGTGTAGCAGTCCTGACCAGCGTCGGCATGGCCTTCG
ACGCCTACATGCCGGTCATGTTGGCCGTCATGGAGATCCCCGGCTGCCTGGTGGCGCTGTATCTGGTGGCGCGGCTGCGG
CACCGAGGGATGAACGAGGCGGGGTACATGGCCGACGAGCCCGGCTACACCACAGCGGCGATGATCGGAGCGGGGCCCGG
CACGCCCGCCCGGCCCGCTCACAGCGACAGCCTCACGGCCCAAGCCGAGCGCGGCATCGAAGAAGAGTTGGAGCTCTCGC
TGGAAAAGCGCGAGCATCCAAATTGGGATGAAGACGGCGTCAAAGACAGCGGCACGAATGCGTCGATCTTCTCACGCGAG
TTGCTGCAGGAAGTTTTCCTCAACCCGGGGCTCGTTCTCCTCTTCGGCGGCATCGTCATCGGCCTGATCAGTGGACTGCA
GGGACAGAAGGTCCTACACGACGACGACAACTTCTTTGTGGCGGCATTCCAGGGCGTACTTTGCCTGTTCCTGTTGGAGA
TGGGCATGACGGCGTCGCGTAAGTTGAAGGATCTGGCGTCGGCGGGCAGTGGGTTCGTTTTCTTCGGCCTGCTGGCACCG
AATCTGTTTGCGACGCTTGGGATCATCGTGGCCCACGGCTACGCATACGTCACTAACAACGACTTCGCGCCGGGCACATA
TGTGCTGTTCGCGGTGCTCTGCGGCGCGGCGTCCTATATCGCCGTCCCGGCCGTGCAACGGCTTGCGATCCCCGAGGCCA
GTCCGACCTTGCCGCTGGCCGCGTCGCTGGGTTTGACGTTCTCCTACAACGTCACGATCGGGATCCCGCTGTACATCGAG
ATCGCCCGCATCGTCGGGCAATGGTTCCCTGCCACCGGGGCTTCGATCGGTTAG

Upstream 100 bases:

>100_bases
TAAGCCCGAGCCACACTTTCTAGATTCGACTTGATATTCCTGGTCGCTCCCCTGACGCTGGGTGCTTCCTGGATCGCCGC
ACCAGGTATGGGAGGCGCCA

Downstream 100 bases:

>100_bases
CCCAGCAGAGTGCGCACCACCGCGTCGGCCAGCAATCGCCCCCGGCCGGTGAGGACCAGTCGGTCGCCGTGGTAGTCCAG
CAATCCGTCGGCCAACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Conserved Domain Protein; Permease-Like Protein; Domain Transmembrane Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLHEFWVNFTHNLFKPLLLFFYFGFLIPIFKVRFEFPYVLYQGLTLYLLLAIGWHGGEELAKIKPSNVGAIVGFMVVGFA
LNFVIGTLAYFLLSKLTAMRRVDRATVAGYYGSDSAGTFATCVAVLTSVGMAFDAYMPVMLAVMEIPGCLVALYLVARLR
HRGMNEAGYMADEPGYTTAAMIGAGPGTPARPAHSDSLTAQAERGIEEELELSLEKREHPNWDEDGVKDSGTNASIFSRE
LLQEVFLNPGLVLLFGGIVIGLISGLQGQKVLHDDDNFFVAAFQGVLCLFLLEMGMTASRKLKDLASAGSGFVFFGLLAP
NLFATLGIIVAHGYAYVTNNDFAPGTYVLFAVLCGAASYIAVPAVQRLAIPEASPTLPLAASLGLTFSYNVTIGIPLYIE
IARIVGQWFPATGASIG

Sequences:

>Translated_417_residues
MLHEFWVNFTHNLFKPLLLFFYFGFLIPIFKVRFEFPYVLYQGLTLYLLLAIGWHGGEELAKIKPSNVGAIVGFMVVGFA
LNFVIGTLAYFLLSKLTAMRRVDRATVAGYYGSDSAGTFATCVAVLTSVGMAFDAYMPVMLAVMEIPGCLVALYLVARLR
HRGMNEAGYMADEPGYTTAAMIGAGPGTPARPAHSDSLTAQAERGIEEELELSLEKREHPNWDEDGVKDSGTNASIFSRE
LLQEVFLNPGLVLLFGGIVIGLISGLQGQKVLHDDDNFFVAAFQGVLCLFLLEMGMTASRKLKDLASAGSGFVFFGLLAP
NLFATLGIIVAHGYAYVTNNDFAPGTYVLFAVLCGAASYIAVPAVQRLAIPEASPTLPLAASLGLTFSYNVTIGIPLYIE
IARIVGQWFPATGASIG
>Mature_417_residues
MLHEFWVNFTHNLFKPLLLFFYFGFLIPIFKVRFEFPYVLYQGLTLYLLLAIGWHGGEELAKIKPSNVGAIVGFMVVGFA
LNFVIGTLAYFLLSKLTAMRRVDRATVAGYYGSDSAGTFATCVAVLTSVGMAFDAYMPVMLAVMEIPGCLVALYLVARLR
HRGMNEAGYMADEPGYTTAAMIGAGPGTPARPAHSDSLTAQAERGIEEELELSLEKREHPNWDEDGVKDSGTNASIFSRE
LLQEVFLNPGLVLLFGGIVIGLISGLQGQKVLHDDDNFFVAAFQGVLCLFLLEMGMTASRKLKDLASAGSGFVFFGLLAP
NLFATLGIIVAHGYAYVTNNDFAPGTYVLFAVLCGAASYIAVPAVQRLAIPEASPTLPLAASLGLTFSYNVTIGIPLYIE
IARIVGQWFPATGASIG

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45009; Mature: 45009

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA