| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823470
Identifier: 148823470
GI number: 148823470
Start: 2548718
End: 2550496
Strand: Reverse
Name: 148823470
Synonym: TBFG_12291
Alternate gene names: NA
Gene position: 2550496-2548718 (Counterclockwise)
Preceding gene: 148823473
Following gene: 148823469
Centisome position: 57.65
GC content: 69.14
Gene sequence:
>1779_bases ATGGCAACAGGGGCGAGACCGGCATTAGGCTTGTCGATCGGTGTCACCAACCTAGCGGCTGTGGCTGCCGATCACTCCAT CACACGTAAACCCGTGCTGACGCTGTATCGACAGCGCCCGCCCGAGGTCGGTGTGCCATCGGAGAACCCGAGGCTGGACG AGCCAGGCCTGGTGATCACCGACTTCGTAGACCGGGTGGGAGATTCGGTCGGCATCGTGGCTGCCGACGGCTCGGTGTAC CGCAGCGAGGCGCTAGTGGCTGACGCACTGCTGGCGCTGGCCTACACCGCTACCGGCGGTCGTGCTCTTCCCGGAAGTGT CACGGTGACCTATCCCGCCCACTGGGGGCCGGCTGCGGTAGCAGCGTTGGATAGCGCGCTGCGTCGGGCCTCGGAATGGT CGCACGGGACTTCGAGTACGGCCCAGCCACTGTCACTGCTCCCTGACGCCGCGGCAGCGCTGTACGCGATACGGGCCGAC CCGGGCATACCGGCCCGTGGGATCGTCGCGGTATGCGACTTCGGTGGCAGCGGGACCGGCATCACGCTCGTCGACGCCGC AGACGAGTATCGGCCGGTGGCCGCGACGGTGCGCCATCAGGCTTTCTCCGGCGATCTGATCGATCAGTCGCTGTTGAGCT ACGTCATGTCCGAACTACCGGGCACGGGCGCGTTCGATCCAGCCGGCACCTCGGCGATCGGCTCACTGACTAAGCTGCGG ATCGAATGTCGCAAAGCCAAGGAACGGCGTTCGTCAAGCACGGTGACCACGCTGACCGACGCGTTGGGCGGGGATATCCG GTTGACCCGCAACGAGCTCGAGGACACAATCCGTGACTCGCTGGACAGCGTGGGCAGGGCCTTGGAACAAACCCTGGCCC GCAGCGGAATTCGCACGGCCGAGCTGGTAGCGATCGTTTCGGTGGGTGGTGGTGCAAATATCCCGGCAGTCACCACGACG CTGTCCGGACGTTTCTGCGTGCCGGTGGTCAGGACGCCTCGTCCGCAATTGACGGCCGCTTTCGGCGGCGCGTTGTGGGC GGCACGCAGACCCGGCGACACCAGCGCAACGGTGCTGACCGCGGTCACCTCGGCGACGGCGACGGCGCCGGCCGATGCGC CGGCGTCGGTCCTGCAGCCCGCTTTGGCCTGGTCGGAGGCCGACGAGGACTCCCACATCGGGCCGGCCCCTGGCTACACA GCGGCCCGCCCGTCGCTGAGCTTCGACCACGATGCCCATGCGGAGCCCGAGCCCAAGTCCCCGCCAATCCCGTGGTATCG CCTGCCGGCCGTGATCATCACCGGCACGACGGTGGCGGTGTTGCTGGTGGGTGCCGCCGTGGCGATCGGGTTGTCCACCG GCGACCAGCCGACGGCGCCGGGGACCCCGCAGAGGCCGGGTGTGACCACGACCGCCGCACCGCCCCCGTCCCCAGCGCCG GCATCCGATGGCCCCACTACCGAGCCCGCACCTCCCGTACAGGCGCCAGCCACCGGTGGGCCCGCGCCGCCGCTGCAGCA GCCGTTGCCGCCTCCGCCGACAACGACGAATACGCAACCGGCGGTGACCACCGATGTCATCACTCCGGCACCGACGACCC CCGCTTCCGCGCCGCCGGCGACCACGCAGCCGCCGGCGACCACGCAGCCGCCGGCGACCACGTCCCCCAGCCCTCCACCG ATCCCGCCGATCCCACCGATTCCGGAGATTCCGCAGCTCCCCCCCGGAATACCTCAGGTTCCCGGGATCGGGCAGTTCAG CGCGATTTCGGGTAGCTGA
Upstream 100 bases:
>100_bases GTCGCTATCCAGATCACCGGCGCCCACATTGGCTATAGGTATGACGGAAAATTCGAGGTAGGCGGTTGCGACGAGCCGCC GGACACGGGGATTGGGCCAT
Downstream 100 bases:
>100_bases CACCGGTGAGCTGCTCGGAGACCTCCCAAAGTCGCTTGCTATCGGCGTCGTTGCGGGCGGCTGCGGGAACCTTGGCCTCT CGCACACCACCGCCGGCGAC
Product: proline rich protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MATGARPALGLSIGVTNLAAVAADHSITRKPVLTLYRQRPPEVGVPSENPRLDEPGLVITDFVDRVGDSVGIVAADGSVY RSEALVADALLALAYTATGGRALPGSVTVTYPAHWGPAAVAALDSALRRASEWSHGTSSTAQPLSLLPDAAAALYAIRAD PGIPARGIVAVCDFGGSGTGITLVDAADEYRPVAATVRHQAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLR IECRKAKERRSSSTVTTLTDALGGDIRLTRNELEDTIRDSLDSVGRALEQTLARSGIRTAELVAIVSVGGGANIPAVTTT LSGRFCVPVVRTPRPQLTAAFGGALWAARRPGDTSATVLTAVTSATATAPADAPASVLQPALAWSEADEDSHIGPAPGYT AARPSLSFDHDAHAEPEPKSPPIPWYRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPPPSPAP ASDGPTTEPAPPVQAPATGGPAPPLQQPLPPPPTTTNTQPAVTTDVITPAPTTPASAPPATTQPPATTQPPATTSPSPPP IPPIPPIPEIPQLPPGIPQVPGIGQFSAISGS
Sequences:
>Translated_592_residues MATGARPALGLSIGVTNLAAVAADHSITRKPVLTLYRQRPPEVGVPSENPRLDEPGLVITDFVDRVGDSVGIVAADGSVY RSEALVADALLALAYTATGGRALPGSVTVTYPAHWGPAAVAALDSALRRASEWSHGTSSTAQPLSLLPDAAAALYAIRAD PGIPARGIVAVCDFGGSGTGITLVDAADEYRPVAATVRHQAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLR IECRKAKERRSSSTVTTLTDALGGDIRLTRNELEDTIRDSLDSVGRALEQTLARSGIRTAELVAIVSVGGGANIPAVTTT LSGRFCVPVVRTPRPQLTAAFGGALWAARRPGDTSATVLTAVTSATATAPADAPASVLQPALAWSEADEDSHIGPAPGYT AARPSLSFDHDAHAEPEPKSPPIPWYRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPPPSPAP ASDGPTTEPAPPVQAPATGGPAPPLQQPLPPPPTTTNTQPAVTTDVITPAPTTPASAPPATTQPPATTQPPATTSPSPPP IPPIPPIPEIPQLPPGIPQVPGIGQFSAISGS >Mature_591_residues ATGARPALGLSIGVTNLAAVAADHSITRKPVLTLYRQRPPEVGVPSENPRLDEPGLVITDFVDRVGDSVGIVAADGSVYR SEALVADALLALAYTATGGRALPGSVTVTYPAHWGPAAVAALDSALRRASEWSHGTSSTAQPLSLLPDAAAALYAIRADP GIPARGIVAVCDFGGSGTGITLVDAADEYRPVAATVRHQAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLRI ECRKAKERRSSSTVTTLTDALGGDIRLTRNELEDTIRDSLDSVGRALEQTLARSGIRTAELVAIVSVGGGANIPAVTTTL SGRFCVPVVRTPRPQLTAAFGGALWAARRPGDTSATVLTAVTSATATAPADAPASVLQPALAWSEADEDSHIGPAPGYTA ARPSLSFDHDAHAEPEPKSPPIPWYRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPPPSPAPA SDGPTTEPAPPVQAPATGGPAPPLQQPLPPPPTTTNTQPAVTTDVITPAPTTPASAPPATTQPPATTQPPATTSPSPPPI PPIPPIPEIPQLPPGIPQVPGIGQFSAISGS
Specific function: Unknown
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59891; Mature: 59760
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGARPALGLSIGVTNLAAVAADHSITRKPVLTLYRQRPPEVGVPSENPRLDEPGLVIT CCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHH DFVDRVGDSVGIVAADGSVYRSEALVADALLALAYTATGGRALPGSVTVTYPAHWGPAAV HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH AALDSALRRASEWSHGTSSTAQPLSLLPDAAAALYAIRADPGIPARGIVAVCDFGGSGTG HHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHEEEEECCCCCCCCCEEEEEECCCCCCC ITLVDAADEYRPVAATVRHQAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLR EEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IECRKAKERRSSSTVTTLTDALGGDIRLTRNELEDTIRDSLDSVGRALEQTLARSGIRTA HHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ELVAIVSVGGGANIPAVTTTLSGRFCVPVVRTPRPQLTAAFGGALWAARRPGDTSATVLT EEEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHH AVTSATATAPADAPASVLQPALAWSEADEDSHIGPAPGYTAARPSLSFDHDAHAEPEPKS HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPIPWYRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPPPSPAP CCCCCEECCEEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCC ASDGPTTEPAPPVQAPATGGPAPPLQQPLPPPPTTTNTQPAVTTDVITPAPTTPASAPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC TTQPPATTQPPATTSPSPPPIPPIPPIPEIPQLPPGIPQVPGIGQFSAISGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATGARPALGLSIGVTNLAAVAADHSITRKPVLTLYRQRPPEVGVPSENPRLDEPGLVIT CCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHH DFVDRVGDSVGIVAADGSVYRSEALVADALLALAYTATGGRALPGSVTVTYPAHWGPAAV HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH AALDSALRRASEWSHGTSSTAQPLSLLPDAAAALYAIRADPGIPARGIVAVCDFGGSGTG HHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHEEEEECCCCCCCCCEEEEEECCCCCCC ITLVDAADEYRPVAATVRHQAFSGDLIDQSLLSYVMSELPGTGAFDPAGTSAIGSLTKLR EEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IECRKAKERRSSSTVTTLTDALGGDIRLTRNELEDTIRDSLDSVGRALEQTLARSGIRTA HHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ELVAIVSVGGGANIPAVTTTLSGRFCVPVVRTPRPQLTAAFGGALWAARRPGDTSATVLT EEEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHH AVTSATATAPADAPASVLQPALAWSEADEDSHIGPAPGYTAARPSLSFDHDAHAEPEPKS HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPIPWYRLPAVIITGTTVAVLLVGAAVAIGLSTGDQPTAPGTPQRPGVTTTAAPPPSPAP CCCCCEECCEEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCC ASDGPTTEPAPPVQAPATGGPAPPLQQPLPPPPTTTNTQPAVTTDVITPAPTTPASAPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC TTQPPATTQPPATTSPSPPPIPPIPPIPEIPQLPPGIPQVPGIGQFSAISGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA