| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148823448
Identifier: 148823448
GI number: 148823448
Start: 2523836
End: 2524633
Strand: Reverse
Name: 148823448
Synonym: TBFG_12269
Alternate gene names: NA
Gene position: 2524633-2523836 (Counterclockwise)
Preceding gene: 148823457
Following gene: 148823447
Centisome position: 57.06
GC content: 67.04
Gene sequence:
>798_bases TTGGGCCAGATCGTGGCGGGCGAAATCGGTGGTCAACGCACTACTCCTGTAGGTGGCGGGCTTCCGCTTGCGTGCTGTTT AGATGGTCGTCCCCCTATCGTGCCGCACCGGCGTCGGCGGCGGATAGCCGCACTCCGCTCGGTTCTGCGGATGCGCGACA CACCACGGCCAGCGCGGTCGCGCTGCGACCAGGTAACCTCACATGCCGTGCTCATCGGATGGCGCGCCGTGCCTCGCAGG CACGGGGGGGAGCTCCCCAGGCGAGGCGCCCTGGCGCTCGGCTGCATCGCGCTGCTGCTGATGGGGATCGTCGGATGTAC CACTGTCACCGACGGTACGGCCATGCCCGACACCAACGTCGCACCGGCCTACCGCTCGTCGGTGTCCGCGTCGGTGTCGG CTTCGGCGGCGACGTCGAGCATCCGGGAGTCGCAGCGCCAACAATCGCTGACGACCAAGGCGATTCGCACCTCGTGTGAC GCGCTGGCGGCCACCAGCAAGGACGCCATCGACAAGGTGAACGCCTACGTGGCCGCGTTCAATCAGGGCCGCAACACCGG GCCGACCGAAGGTCCGGCCATCGACGCGCTCAACAACAGTGCCTCGACGGTCTCAGGCAGTCTGAGCGCCGCGCTGTCCG CGCAACTGGGGGATGCGCTCAACGCATATGTCGACGCGGCCCGCGCGGTGGCAAATGCCATCGGTGCGCACGCGTCGACA GCGGAATTCAACCGGCGGGTTGATCGGCTCAACGACACCAAGACAAAGGCATTGACAATGTGCGTGGCCGCCTTCTGA
Upstream 100 bases:
>100_bases GCCACTCCGAGGTCTCCTCGGGATCAATGTCGGGCAAATACGACGCCACACCCTCGCGGATCACCCGAACTCGGTCGGGT TCGCTTGCGCTGTTTGAGTT
Downstream 100 bases:
>100_bases GGCGGGCGGGTGGACCGGTTCTGGCTGTGCGACGATAATGCCCATCGCGACGGTGTGCACATGGCCCGCGGAGACTGAAG GAGGTTCCACGGTGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRR HGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCD ALAATSKDAIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHAST AEFNRRVDRLNDTKTKALTMCVAAF
Sequences:
>Translated_265_residues MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRR HGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCD ALAATSKDAIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHAST AEFNRRVDRLNDTKTKALTMCVAAF >Mature_264_residues GQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRH GGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDA LAATSKDAIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTA EFNRRVDRLNDTKTKALTMCVAAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2240_MYCTU (Q10522)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: D70778 - RefSeq: NP_216756.1 - RefSeq: NP_336770.1 - IntAct: Q10522 - EnsemblBacteria: EBMYCT00000000112 - EnsemblBacteria: EBMYCT00000070444 - GeneID: 888600 - GeneID: 924125 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2300 - KEGG: mtu:Rv2240c - TIGR: MT2300 - TubercuList: Rv2240c - GeneTree: EBGT00050000017614 - HOGENOM: HBG564766 - OMA: DQLNDTK - ProtClustDB: CLSK791716
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27530; Mature: 27398
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1baf28c4)-;
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARS CCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH RCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNV HHHHHHHHHHEEEHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDALAATSKDAIDKVNAYVAAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHAST HCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AEFNRRVDRLNDTKTKALTMCVAAF HHHHHHHHHHCCHHHHHHHHHHHCH >Mature Secondary Structure GQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARS CCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH RCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNV HHHHHHHHHHEEEHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC APAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDALAATSKDAIDKVNAYVAAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH NQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHAST HCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AEFNRRVDRLNDTKTKALTMCVAAF HHHHHHHHHHCCHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036