| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823445
Identifier: 148823445
GI number: 148823445
Start: 2521587
End: 2522402
Strand: Direct
Name: 148823445
Synonym: TBFG_12266
Alternate gene names: NA
Gene position: 2521587-2522402 (Clockwise)
Preceding gene: 148823443
Following gene: 148823449
Centisome position: 56.99
GC content: 65.07
Gene sequence:
>816_bases ATGAAGCGGCCAGCTACCCGGGTTGCCGACCTGTTGAACCCGGCGGCAATGTTGTTGCCGGCAGCGAATGTCATCATGCA GCTGGCAGTGCCGGGTGTCGGGTATGGCGTGCTGGAAAGCCCGGTGGACAGCGGCAACGTCTACAAGCATCCGTTCAAGC GGGCCCGGACCACCGGCACCTACCTGGCGGTGGCGACCATCGGGACGGAATCCGACCGAGCGCTGATCCGGGGTGCCGTG GACGTCGCGCACCGGCAGGTTCGGTCGACGGCCTCGAGCCCGGTGTCCTATAACGCCTTCGACCCGAAGTTGCAGCTGTG GGTGGCGGCGTGTCTGTACCGCTACTTCGTGGACCAGCACGAGTTTCTGTACGGCCCACTCGAAGATGCCACCGCCGACG CCGTCTACCAAGACGCCAAACGGTTAGGGACCACGCTGCAGGTGCCGGAGGGGATGTGGCCGCCGGACCGGGTCGCGTTC GACGAGTACTGGAAGCGCTCGCTTGATGGGCTGCAGATCGACGCGCCGGTGCGCGAGCATCTTCGCGGGGTGGCCTCGGT AGCGTTTCTCCCGTGGCCGTTGCGCGCGGTGGCCGGGCCGTTCAACCTGTTTGCGACGACGGGATTCTTGGCACCGGAGT TCCGCGCGATGATGCAGCTGGAGTGGTCACAGGCCCAGCAGCGTCGCTTCGAGTGGTTACTTTCCGTGCTACGGTTAGCC GACCGGCTGATTCCGCATCGGGCCTGGATCTTCGTTTACCAGCTTTACTTGTGGGACATGCGGTTTCGCGCCCGACACGG CCGCCGAATCGTCTGA
Upstream 100 bases:
>100_bases CCGACGGCCCTGGTCTGCCAGGTCGATGCAAACACTCCGGCAGCGTCGCACACGTGGTCTACGCTCAGCTATTTATGACC TCATACGGCAGCTATCCACG
Downstream 100 bases:
>100_bases TAGAGCCCGGCCGAGTGTGAGCCTGACAGCCCGACACCGGCGGCGTGTGTCGCGTCGCCAGGTTCACGCTCGGCGATCTA GAGCCGCCGAAAACCTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF DEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV
Sequences:
>Translated_271_residues MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF DEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV >Mature_271_residues MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGTYLAVATIGTESDRALIRGAV DVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQHEFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAF DEYWKRSLDGLQIDAPVREHLRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018713 [H]
Pfam domain/function: PF09995 DUF2236 [H]
EC number: NA
Molecular weight: Translated: 30774; Mature: 30774
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCC YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQH EEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH EFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREH HHHCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHH LRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA HHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRPATRVADLLNPAAMLLPAANVIMQLAVPGVGYGVLESPVDSGNVYKHPFKRARTTGT CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCC YLAVATIGTESDRALIRGAVDVAHRQVRSTASSPVSYNAFDPKLQLWVAACLYRYFVDQH EEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH EFLYGPLEDATADAVYQDAKRLGTTLQVPEGMWPPDRVAFDEYWKRSLDGLQIDAPVREH HHHCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHCCCCEECHHHHHH LRGVASVAFLPWPLRAVAGPFNLFATTGFLAPEFRAMMQLEWSQAQQRRFEWLLSVLRLA HHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLIPHRAWIFVYQLYLWDMRFRARHGRRIV HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]