| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148823384
Identifier: 148823384
GI number: 148823384
Start: 2451485
End: 2452150
Strand: Reverse
Name: 148823384
Synonym: TBFG_12205
Alternate gene names: NA
Gene position: 2452150-2451485 (Counterclockwise)
Preceding gene: 148823385
Following gene: 148823382
Centisome position: 55.42
GC content: 65.02
Gene sequence:
>666_bases ATGCGCTCGAAGATCCCCGATCTGCAGCGGGCGCTGGAAGGGCGCTTCGATGATCACCATGCCCTGATGTGTAGGTTGCA CCTGGCTCATCTGGATCAGCTCGATGCGATGATCGGTGCTCTCGACGAGCAGATCGAGCAGCTGATGCATCCCTTTTGTG CCCGACGCGAGCTGATTGCATCGATCCCGGGGATCGGGGTGGGTGCCTCGGCGACGGTCATCTCTGAAATCGGCGCCGAC CCGGCGGCCTGGTTCCCCTCGGCTGAGCATCTGGCCTCGTGGGTGCGGCTGTGCCCGGGCAACCACGAATCGGCCGGCAA ACGCCATCACGGTGCCCGCCGCACAGGCAACCAGCACCTGCAGCCGGTCCTGGTCGAGTGCGCGTGGGCCGCCGTGCGCA CCGATGGCTACCTGCGCGAGTACTACCGCCGCCAGGTCCGCAAGTTCGGTGGCTTCCGCAGTCCCGCTGCCAACAAGAAG GCGATCATCGCCGTCGCCCACAAGCTGATCGTCATCATTTGGCACGTGCTGGCCACCGGCCGGCCTTACCAGGATCTCGG CGCCGACTACTTCACCACCCGCATGGATCCCGACAAAGAACGACGTCGCCTCGTCGCCAAACTCGAAGCCCAAGGATTGG GGGTCACCCTCGAACCTGCCGCCTGA
Upstream 100 bases:
>100_bases AGCGGTGCGCCTTTGTTGATGTGGGCCAGGACATCATCGCGGTGGCGGTGTGGGTGCCGGGCGAGGGTCCTGACGGGCGC AAGACGATCAAGCGCACCTT
Downstream 100 bases:
>100_bases AACCCCGACATACACACTGTCACCAACAGACCCGGCTTCGCTGCAGTCGCCGGCGGGTCACGCTTGCCGTGGTCACCTTA ATTCACGTACCAGCCCCCAT
Product: transposase
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRSKIPDLQRALEGRFDDHHALMCRLHLAHLDQLDAMIGALDEQIEQLMHPFCARRELIASIPGIGVGASATVISEIGAD PAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKK AIIAVAHKLIVIIWHVLATGRPYQDLGADYFTTRMDPDKERRRLVAKLEAQGLGVTLEPAA
Sequences:
>Translated_221_residues MRSKIPDLQRALEGRFDDHHALMCRLHLAHLDQLDAMIGALDEQIEQLMHPFCARRELIASIPGIGVGASATVISEIGAD PAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKK AIIAVAHKLIVIIWHVLATGRPYQDLGADYFTTRMDPDKERRRLVAKLEAQGLGVTLEPAA >Mature_221_residues MRSKIPDLQRALEGRFDDHHALMCRLHLAHLDQLDAMIGALDEQIEQLMHPFCARRELIASIPGIGVGASATVISEIGAD PAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKK AIIAVAHKLIVIIWHVLATGRPYQDLGADYFTTRMDPDKERRRLVAKLEAQGLGVTLEPAA
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24633; Mature: 24633
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKIPDLQRALEGRFDDHHALMCRLHLAHLDQLDAMIGALDEQIEQLMHPFCARRELIA CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIPGIGVGASATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQHL HCCCCCCCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHCCCCHHH QPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKKAIIAVAHKLIVIIWHVLATG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RPYQDLGADYFTTRMDPDKERRRLVAKLEAQGLGVTLEPAA CCHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure MRSKIPDLQRALEGRFDDHHALMCRLHLAHLDQLDAMIGALDEQIEQLMHPFCARRELIA CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIPGIGVGASATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQHL HCCCCCCCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHCCCCHHH QPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKKAIIAVAHKLIVIIWHVLATG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RPYQDLGADYFTTRMDPDKERRRLVAKLEAQGLGVTLEPAA CCHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA