| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823315
Identifier: 148823315
GI number: 148823315
Start: 2379310
End: 2380143
Strand: Direct
Name: 148823315
Synonym: TBFG_12136
Alternate gene names: NA
Gene position: 2379310-2380143 (Clockwise)
Preceding gene: 148823314
Following gene: 148823319
Centisome position: 53.78
GC content: 68.94
Gene sequence:
>834_bases GTGAGTAGCACCTGGTATCCACCACCGTCCCGGCCCCGTCCGGTCGAGGGTGGGATCAAGGCGCGCAGCACCCGCGGCGC GATCGCGCAGACCTGGTGGTCGGAGCGGTTCATTGCGGTGCTGGAGGACATCGGCCTGGGTAACCGGCTGCAGCGTGGCC GCAGCTATGCGCGCAAGGGGCAGGTGATCTCGCTGCAGGTGGATGCCGGCTTGGTCACCGCGCTGGTGCAGGGCAGCCGG GCCCGGCCGTACCGGATCCGCATCGGGATTCCGGCGTTCGGCAAGTCGCAATGGGCGCACGTCGAGCGAACCCTGGCCGA AAACGCTTGGTACGCAGCAAAATTGCTGTCCGGCGAAATGCCCGAAGACATCGAGGACGTCTTCGCCGGCCTGGGCCTGT CGCTATTCCCCGGCACCGCCCGAGAGCTATCACTGGACTGCTCCTGCCCCGACTACGCGGTCCCATGCAAGCACCTGGCC GCCACCTTCTACTTGCTGGCCGAGTCCTTCGACGAGGATCCGTTCGCCATCCTGGCGTGGCGTGGCCGCGAGCGGGAGGA TCTGCTGGCCAACCTGGCCGCTGCCCGCGCCGACGGAGCGGCACCGGCCGCCGACCACGCCGAACAAGTGGCCCAGCCGC TCACCGACTGCCTAGACCGCTATTACGCCCGGCAGGCCGACATCAATGTCCCCAGCCCGCCGGCAACCCCATCGACGGCA TTGCTCGACCAGCTGCCCGACACCGGACTCAGCGCCCGCGGACGGCCGCTGACCGAGCTCCTGCGACCCGCCTATCACGC CCTGACGCACCATCACAACAGCGCGGGCGGCTGA
Upstream 100 bases:
>100_bases GCGCTGGCCGACTTGGTGGTCACCGACGGCGAAGGCTGGCTGACCGAACTGTCCACCCGCGATCTGCGCGAGGTGTTCGC GCTGTCCGAAGGCGCCGTCG
Downstream 100 bases:
>100_bases TCCCAGCGCACCCCTTCGAATCGGCCGAAGTCACTGTCGTAGGACACGATGCTGGCGCGATGCTCGACGGCAAGCGCGGC CAGATGCGCGTCGTTGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSSTWYPPPSRPRPVEGGIKARSTRGAIAQTWWSERFIAVLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSR ARPYRIRIGIPAFGKSQWAHVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLA ATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTA LLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG
Sequences:
>Translated_277_residues MSSTWYPPPSRPRPVEGGIKARSTRGAIAQTWWSERFIAVLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSR ARPYRIRIGIPAFGKSQWAHVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLA ATFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTA LLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG >Mature_276_residues SSTWYPPPSRPRPVEGGIKARSTRGAIAQTWWSERFIAVLEDIGLGNRLQRGRSYARKGQVISLQVDAGLVTALVQGSRA RPYRIRIGIPAFGKSQWAHVERTLAENAWYAAKLLSGEMPEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAA TFYLLAESFDEDPFAILAWRGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTAL LDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG
Specific function: Unknown
COG id: COG4279
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30165; Mature: 30034
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTWYPPPSRPRPVEGGIKARSTRGAIAQTWWSERFIAVLEDIGLGNRLQRGRSYARKG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC QVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAHVERTLAENAWYAAKLLSGEM CEEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAATFYLLAESFDEDPFAILAW CHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE RGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTA CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSTWYPPPSRPRPVEGGIKARSTRGAIAQTWWSERFIAVLEDIGLGNRLQRGRSYARKG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC QVISLQVDAGLVTALVQGSRARPYRIRIGIPAFGKSQWAHVERTLAENAWYAAKLLSGEM CEEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PEDIEDVFAGLGLSLFPGTARELSLDCSCPDYAVPCKHLAATFYLLAESFDEDPFAILAW CHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE RGREREDLLANLAAARADGAAPAADHAEQVAQPLTDCLDRYYARQADINVPSPPATPSTA CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LLDQLPDTGLSARGRPLTELLRPAYHALTHHHNSAGG HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA