| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148823228
Identifier: 148823228
GI number: 148823228
Start: 2268778
End: 2269398
Strand: Direct
Name: 148823228
Synonym: TBFG_12045
Alternate gene names: NA
Gene position: 2268778-2269398 (Clockwise)
Preceding gene: 148823227
Following gene: 148823229
Centisome position: 51.28
GC content: 71.01
Gene sequence:
>621_bases GTGTCGATCGTCGATGCGCGTGGGCGCGAGGTTCGCCGCGCCACGATCGAGCACAACGCCGCCGGACTGCGCGAGCTGCT CGAGCTGCTGAGCCGGGCCGGTGCCCGCGAGGTCGCCATCGAACGCCCGGACGGCCCGGTCGTGGATACCCTGCTCGAGG CCGGGATCACGGTGGTGGTGATCAGCCCCAACCAGCTGAAGAATCTGCGCGGTCGTTACGGCTCGGCTGGCAACAAGGAC GACCGGTTCGACGCGTTCGTGCTCGCCGACACGTTGCGCACCGACCGGTCCCGGCTGCGCCCCCTGCTGCCCGACACCCC GGCCACGGCCACCCTGCGCCGGACCTGCCGCCCCCGCAAAGACCTCGTCGCCCACCGGGTTGCGTTGGCCAATCAGCTGC GCGCGCACCTGCGCGTCGTCTTTCCGGGTGTGGTCGGGTTGTTCGCTGACCTTGACTCGCCGATCAGCCTCGCGTTTTTG ACGTTTTTGCCCCGTTTCGACTGCCAGGACCGCGCGGACTGGCTGTCGGTCAAGCGCCTGGCCGGCTGGCTGGCCGCCGC TGGCTACTGCGGCCGTGCTCCACGACCGGCTCACCGGTGCCCCGCGCGGCGCCACCGGTGA
Upstream 100 bases:
>100_bases GACGAGCGCCGAACAGTGAGCGGCCCAAACCACTACCCTGCCCGACGAGCCGCGGAACGGCGTCACGGGTGGAATCGATT GGGCGCGAGATGATCACGCG
Downstream 100 bases:
>100_bases CGAGGGTGCCGCCAACGCCCACATCACCCGGGCCATGGTCGCCGCGCTCACCAGCGTCGCGACCCAGATCAAGACGCTCG ACGCGCAGATCGCCGAACAG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKD DRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFL TFLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sequences:
>Translated_206_residues MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKD DRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFL TFLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR >Mature_205_residues SIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDD RFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLT FLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002525 [H]
Pfam domain/function: PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 22868; Mature: 22737
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEE ISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRK ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH DLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH AGWLAAAGYCGRAPRPAHRCPARRHR HHHHHHHHCCCCCCCCHHCCCCCCCC >Mature Secondary Structure SIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEE ISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRK ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH DLVAHRVALANQLRAHLRVVFPGVVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH AGWLAAAGYCGRAPRPAHRCPARRHR HHHHHHHHCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]