| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823191
Identifier: 148823191
GI number: 148823191
Start: 2228008
End: 2229054
Strand: Direct
Name: 148823191
Synonym: TBFG_12008
Alternate gene names: NA
Gene position: 2228008-2229054 (Clockwise)
Preceding gene: 148823189
Following gene: 148823192
Centisome position: 50.36
GC content: 65.43
Gene sequence:
>1047_bases ATGTCTCAGACACCCGCTACAACCCGCAAAACGTTTCCCGAGATCAGCTCAAGAGCGTGGGAGCACCCCGCCGACCGGAC CGCCCTTTCCGCGCTGCGCCGGCTCAAAGGCTTCGACCAGATCTTGAAGCTGATGTCGGGGATGTTGCGGGAACGGCAGC ACCGGCTGCTGTACCTGGCCAGCGCGGCACGGGTCGGGCCGCGGCAGTTCGCCGACCTCGACGCGCTGCTGGACGAATGC GTGGATGTGCTGGACGCGTCGGCGAAACCCGAACTCTACGTGATGCAGTCACCAATCGCGGATGCCTTCACCATCGGCAT GGGCAAGCCATTCACCGTGATCACCTCGGGGCTGTACGACCTGGTGACACACGACGAGATGCGGTTCGTGATGGGCCACG AGCTCGGCCACGCACTGTCCGGCCACGCGGTGTACCGCACGATGATGATGCATCTGCTGCGGTTGGCCCGGTCATTCGGC GTCTTGCCGGTTGGCGGCTGGGCGCTGCGCGCAATCGTGGCTGCGCTGCTGGAATGGCAGCGCAAATCGGAGCTGTCCGG CGATCGCGCTGGGTTGCTGTGCGCGCAGGATTTGGACACCGCGCTCAGGGTGGAGATGAAGCTCGCTGGCGGCTGCCGGC TGGACAAGCTGGACTCGGAGGCCTTCTTGGCTCAGGCCCGGGAATACGAGACATCCGGCGATATGCGCGACGGGGTGCTC AAGCTGCTCAACCTGGAGCTGCAGACCCATCCGTTCTCGGTGCTGCGGGCTGCCGCCTTGACTCACTGGGTGGACACCGG CGGCTATGCCAAGGTGATAGCCGGCGAGTACCCGCGTCGGGCCGACGACGGCAACGCCAAATTTGCAGACGACCTTGGCG CGGCCGCCCGGTACTACCGGGACGGCTTCGACCAGTCCAACGACCCGCTGATCAAAGGTATCCGCGACGGATTCGGTGGC ATCGTCGAGGGCGTGGGACGGGCAGCCTCGAACGCGGCCGATTCATTGGGCCGCAAGATCACCGAGTGGCGGCAGCCCTC GAAGTGA
Upstream 100 bases:
>100_bases TGGTGTGTGGCCTCCCAGGGTGCTGGGCTGCGGTTTCGCCAACCAACCTGCTGGTCGGCGCGCCGTATTCTGAAGACCGG ACCAACGAGGGGACCGAGCC
Downstream 100 bases:
>100_bases CGGCCCCTCTGCTACGTAGCTAAGCACGCGCGACCGGCGGGCTGGGGAGCCCGGTCAGCGGTCTCATAGCATTGCGAACA CGGGACGTCGAGAGGGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: M48 Family Peptidase; Peptidase M; M48A Family Peptidase; Zn-Dependent Protease; Zn-Dependent Protease With Chaperone Function; Metallopeptidase; Protease; Zn-Dependent Protease With Chaperone Function-Like Protein
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSQTPATTRKTFPEISSRAWEHPADRTALSALRRLKGFDQILKLMSGMLRERQHRLLYLASAARVGPRQFADLDALLDEC VDVLDASAKPELYVMQSPIADAFTIGMGKPFTVITSGLYDLVTHDEMRFVMGHELGHALSGHAVYRTMMMHLLRLARSFG VLPVGGWALRAIVAALLEWQRKSELSGDRAGLLCAQDLDTALRVEMKLAGGCRLDKLDSEAFLAQAREYETSGDMRDGVL KLLNLELQTHPFSVLRAAALTHWVDTGGYAKVIAGEYPRRADDGNAKFADDLGAAARYYRDGFDQSNDPLIKGIRDGFGG IVEGVGRAASNAADSLGRKITEWRQPSK
Sequences:
>Translated_348_residues MSQTPATTRKTFPEISSRAWEHPADRTALSALRRLKGFDQILKLMSGMLRERQHRLLYLASAARVGPRQFADLDALLDEC VDVLDASAKPELYVMQSPIADAFTIGMGKPFTVITSGLYDLVTHDEMRFVMGHELGHALSGHAVYRTMMMHLLRLARSFG VLPVGGWALRAIVAALLEWQRKSELSGDRAGLLCAQDLDTALRVEMKLAGGCRLDKLDSEAFLAQAREYETSGDMRDGVL KLLNLELQTHPFSVLRAAALTHWVDTGGYAKVIAGEYPRRADDGNAKFADDLGAAARYYRDGFDQSNDPLIKGIRDGFGG IVEGVGRAASNAADSLGRKITEWRQPSK >Mature_347_residues SQTPATTRKTFPEISSRAWEHPADRTALSALRRLKGFDQILKLMSGMLRERQHRLLYLASAARVGPRQFADLDALLDECV DVLDASAKPELYVMQSPIADAFTIGMGKPFTVITSGLYDLVTHDEMRFVMGHELGHALSGHAVYRTMMMHLLRLARSFGV LPVGGWALRAIVAALLEWQRKSELSGDRAGLLCAQDLDTALRVEMKLAGGCRLDKLDSEAFLAQAREYETSGDMRDGVLK LLNLELQTHPFSVLRAAALTHWVDTGGYAKVIAGEYPRRADDGNAKFADDLGAAARYYRDGFDQSNDPLIKGIRDGFGGI VEGVGRAASNAADSLGRKITEWRQPSK
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38308; Mature: 38177
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPATTRKTFPEISSRAWEHPADRTALSALRRLKGFDQILKLMSGMLRERQHRLLYLA CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAARVGPRQFADLDALLDECVDVLDASAKPELYVMQSPIADAFTIGMGKPFTVITSGLYD HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHH LVTHDEMRFVMGHELGHALSGHAVYRTMMMHLLRLARSFGVLPVGGWALRAIVAALLEWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RKSELSGDRAGLLCAQDLDTALRVEMKLAGGCRLDKLDSEAFLAQAREYETSGDMRDGVL HHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH KLLNLELQTHPFSVLRAAALTHWVDTGGYAKVIAGEYPRRADDGNAKFADDLGAAARYYR HHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHH DGFDQSNDPLIKGIRDGFGGIVEGVGRAASNAADSLGRKITEWRQPSK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQTPATTRKTFPEISSRAWEHPADRTALSALRRLKGFDQILKLMSGMLRERQHRLLYLA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAARVGPRQFADLDALLDECVDVLDASAKPELYVMQSPIADAFTIGMGKPFTVITSGLYD HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCHHHHHHHHHH LVTHDEMRFVMGHELGHALSGHAVYRTMMMHLLRLARSFGVLPVGGWALRAIVAALLEWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RKSELSGDRAGLLCAQDLDTALRVEMKLAGGCRLDKLDSEAFLAQAREYETSGDMRDGVL HHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH KLLNLELQTHPFSVLRAAALTHWVDTGGYAKVIAGEYPRRADDGNAKFADDLGAAARYYR HHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHH DGFDQSNDPLIKGIRDGFGGIVEGVGRAASNAADSLGRKITEWRQPSK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA