| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823183
Identifier: 148823183
GI number: 148823183
Start: 2221109
End: 2222380
Strand: Direct
Name: 148823183
Synonym: TBFG_12000
Alternate gene names: NA
Gene position: 2221109-2222380 (Clockwise)
Preceding gene: 148823182
Following gene: 148823184
Centisome position: 50.2
GC content: 66.75
Gene sequence:
>1272_bases GTGACAACGAAACTCAGACGTGCCCGCTCGGTGTTGGCGACCGCCCTGGTGCTGGTCGCGGGCGTGATCCTGGCCATGCG CACCGCCGACGCCGCCGCCCGCACGACCGTGGTCGCCTACTTCGACAACAGCAACGGTGTGTTCGCCGGTGACGACGTGC TCATTCGGGGCGTGCCGGTGGGCAAGATCGTCAAGATCGAACCGCAACCGCTGCGCGCCAAGATTTCGTTCTGGTTCGAC CGCAAATACCGAGTCCCCGCCGATGCCGCCGCGGCGATCCTGTCGCCGCAACTGGTGACCGGCCGGGCCATCCAGCTGAC ACCGCCGTATGCCGGCGGGCCGACCATGGCCGACGGCACAGTAATCCCGCAAGAGCGCACCGTGGTGCCGGTGGAGTGGG ACGACTTGCGGGCGCAACTTCAGCGGCTGACCGCATTGCTGCAGCCCACCCGGCCGGGCGGCGTCAGCACGCTGGGTGCG CTCATCAATACTGCCGCCGACAACCTGCGCGGGCAAGGCGCCACCATCCGCGACACCATCATCAAACTGTCACAAGCGAT TTCGGCTCTCGGTGACCACAGCAAAGACATCTTCTCCACCGTGACGAACCTGTCGACGCTGGTCACGGCGCTGCATGACA GCGCTGACCTGCTCGAACGGCTCAACCACAACCTGGCCGCGGTGACCTCGCTGCTGGCCGATGGCCCGGACAAGATCGGT CAGGCAGCCGAGGACCTCAACGCGGTCGTAGCCGACGTCGGCAGCTTCGCCGCCGAGCACCGCGAGGCGATCGGCACCGC ATCAGACAAGCTCGCGTCAATCACCACCGCGCTGGTCGACAGCCTCGACGACATCAAGCAGACGCTGCATATCAGCCCGA CGGTGTTGCAGAACTTCAACAACATCTTCGAACCGGCCAACGGCGCGCTGACCGGCGCGCTGGCGGGCAACAACATGGCC AACCCAATCGCCTTCCTGTGCGGCGCGATCCAGGCTGCCTCCCGGCTGGGCGGCGAGCAAGCGGCCAAATTGTGCGTGCA ATACCTGGCGCCGATCGTGAAGAACCGCCAGTACAACTACCCGCCGCTGGGGGCGAACCTGTTCGTCGGGGCGCAGGCCA GGCCTAACGAGGTCACCTACAGCGAGGACTGGCTGCGGCCCGATTACGTTGCACCAGTTGCGGACACGCCGCCAGATCCG GCCGCGGCCGTGACCGTCGATCCCGCGACCGGCCTGCGCGGCATGATGATGCCGCCGGGGGGTGGCTCGTGA
Upstream 100 bases:
>100_bases ATCCCGGCGATCCGCGCTATCCGTACCGGCCGGAGCCGCCCGCGCCGCCGCCCGGCGGGCCGCCGCCCGGCCCGCCCGCG CAGCAGCCGGGAGACCAACC
Downstream 100 bases:
>100_bases GGATCGGCCTGACCCTGGTGATGATCGCGGCCGTGGTAGCGAGCTGCGGCTGGCGCGGGCTGAATTCGCTGCCGCTGCCC GGCACGCAGGGCAACGGCCC
Product: MCE-family protein mce3D
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family; LOW QUALITY PROTEIN Protein
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTTKLRRARSVLATALVLVAGVILAMRTADAAARTTVVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQPLRAKISFWFD RKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQERTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGA LINTAADNLRGQGATIRDTIIKLSQAISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIG QAAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEPANGALTGALAGNNMA NPIAFLCGAIQAASRLGGEQAAKLCVQYLAPIVKNRQYNYPPLGANLFVGAQARPNEVTYSEDWLRPDYVAPVADTPPDP AAAVTVDPATGLRGMMMPPGGGS
Sequences:
>Translated_423_residues MTTKLRRARSVLATALVLVAGVILAMRTADAAARTTVVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQPLRAKISFWFD RKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQERTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGA LINTAADNLRGQGATIRDTIIKLSQAISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIG QAAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEPANGALTGALAGNNMA NPIAFLCGAIQAASRLGGEQAAKLCVQYLAPIVKNRQYNYPPLGANLFVGAQARPNEVTYSEDWLRPDYVAPVADTPPDP AAAVTVDPATGLRGMMMPPGGGS >Mature_422_residues TTKLRRARSVLATALVLVAGVILAMRTADAAARTTVVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQPLRAKISFWFDR KYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQERTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGAL INTAADNLRGQGATIRDTIIKLSQAISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQ AAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEPANGALTGALAGNNMAN PIAFLCGAIQAASRLGGEQAAKLCVQYLAPIVKNRQYNYPPLGANLFVGAQARPNEVTYSEDWLRPDYVAPVADTPPDPA AAVTVDPATGLRGMMMPPGGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44420; Mature: 44289
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKLRRARSVLATALVLVAGVILAMRTADAAARTTVVAYFDNSNGVFAGDDVLIRGVPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCCEEECCCEEEECCCC GKIVKIEPQPLRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGT CCEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHCCCCEEEECCCCCCCCCCCCCE VIPQERTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTI ECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH IKLSQAISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCHHHHH QAAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NIFEPANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKLCVQYLAPIVKNRQYNY HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC PPLGANLFVGAQARPNEVTYSEDWLRPDYVAPVADTPPDPAAAVTVDPATGLRGMMMPPG CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCC GGS CCC >Mature Secondary Structure TTKLRRARSVLATALVLVAGVILAMRTADAAARTTVVAYFDNSNGVFAGDDVLIRGVPV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCCEEECCCEEEECCCC GKIVKIEPQPLRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGT CCEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHCCCCEEEECCCCCCCCCCCCCE VIPQERTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTI ECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH IKLSQAISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCHHHHH QAAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NIFEPANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKLCVQYLAPIVKNRQYNY HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC PPLGANLFVGAQARPNEVTYSEDWLRPDYVAPVADTPPDPAAAVTVDPATGLRGMMMPPG CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCC GGS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA