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The map label for this gene is yrbD [C]

Identifier: 148823181

GI number: 148823181

Start: 2218855

End: 2219883

Strand: Direct

Name: yrbD [C]

Synonym: TBFG_11998

Alternate gene names: 148823181

Gene position: 2218855-2219883 (Clockwise)

Preceding gene: 148823180

Following gene: 148823182

Centisome position: 50.15

GC content: 65.99

Gene sequence:

>1029_bases
ATGAGGGAGAACCTGGGGGGCGTCGTGGTGCGCCTCGGCGTCTTCCTGGCGGTATGCCTGCTGACGGCGTTCCTGCTGAT
TGCCGTCTTCGGGGAGGTGCGCTTCGGCGACGGCAAGACCTACTACGCCGAGTTCGCCAACGTGTCCAATCTGCGAACGG
GCAAGCTGGTGCGCATCGCCGGCGTCGAGGTCGGCAAGGTCACCAGGATCTCCATCAACCCCGACGCGACGGTGCGGGTG
CAGTTCACCGCCGACAACTCGGTCACCCTCACGCGGGGCACCCGGGCGGTGATCCGCTACGACAACCTGTTCGGTGACCG
CTATTTGGCGCTGGAGGAAGGGGCCGGCGGACTCGCCGTTCTTCGTCCCGGTCACACGATTCCGTTGGCGCGCACCCAAC
CGGCGTTGGATCTGGATGCCCTGATCGGTGGATTCAAGCCGCTGTTTCGTGCGCTGAACCCCGAGCAGGTCAACGCGCTG
AGCGAACAGTTGCTGCACGCGTTTGCCGGACAGGGGCCCACGATCGGGTCATTGCTGGCCCAGTCCGCGGCCGTGACCAA
CACCCTGGCCGACCGTGATCGGCTGATCGGGCAGGTGATCACCAACCTCAACGTGGTGCTGGGCTCGCTGGGCGCTCACA
CCGATCGGTTGGACCAGGCGGTGACGTCGCTATCAGCGTTGATTCACCGGCTCGCGCAACGCAAGACCGACATCTCCAAC
GCCGTGGCCTACACCAACGCCGCCGCCGGCTCGGTCGCCGATCTGCTGTCGCAGGCTCGCGCGCCGTTGGCGAAGGTGGT
TCGCGAGACCGATCGGGTGGCCGGCATCGCGGCCGCCGACCACGACTACCTCGACAATCTGCTCAACACGCTGCCGGACA
AATACCAGGCGCTGGTCCGCCAGGGTATGTACGGCGACTTCTTCGCCTTCTACCTGTGCGACGTCGTGCTCAAGGTCAAC
GGCAAGGGCGGCCAGCCGGTGTACATCAAGCTGGCCGGTCAGGACAGCGGGCGGTGCGCGCCGAAATGA

Upstream 100 bases:

>100_bases
ACTACTTCCCGGTGACCCGCGCGGTGCCCGAGCCGCCGTCGATCCGTCAGTGCATCCCCGGGCCGGCGATCGGGCCCAAC
CCCGCGGCGGGGGAGCAGCC

Downstream 100 bases:

>100_bases
AATCCTTCGCCGAACGCAACCGTCTGGCCATCGGCACAGTCGGCATCGTCGTCGTCGCCGCCGTTGCGCTGGCCGCGCTG
CAATACCAGCGGCTGCCGTT

Product: MCE-family protein mce3B

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; MCE-Family B; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mce-Related Protein; MCE-Family C; Mce Family B; Virulence Factor MCE-Like Protein; MCE-Family; Mce Family C; Mce-Family C; Mce Family D; Mce Family Protein Mce5B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRV
QFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNAL
SEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISN
AVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVN
GKGGQPVYIKLAGQDSGRCAPK

Sequences:

>Translated_342_residues
MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRV
QFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNAL
SEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISN
AVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVN
GKGGQPVYIKLAGQDSGRCAPK
>Mature_342_residues
MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRV
QFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNAL
SEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISN
AVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVN
GKGGQPVYIKLAGQDSGRCAPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36515; Mature: 36515

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEHHHCCCCCCCCCCEEEEE
GVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAV
CCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCEEE
LRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLA
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
AVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHHHHH
QGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK
CCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEEHHHCCCCCCCCCCEEEEE
GVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAV
CCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCEEE
LRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLA
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
AVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCHHHHHHHH
QGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK
CCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA