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The map label for this gene is ybcL [C]

Identifier: 148823122

GI number: 148823122

Start: 2164967

End: 2165581

Strand: Reverse

Name: ybcL [C]

Synonym: TBFG_11939

Alternate gene names: 148823122

Gene position: 2165581-2164967 (Counterclockwise)

Preceding gene: 148823123

Following gene: 148823121

Centisome position: 48.95

GC content: 65.2

Gene sequence:

>615_bases
ATGATCAATATGGAATCGACAGTGGCGCACGCATTTCACCGGTTCGCACTGGCCATCTTGGGGCTGGCGCTCCCCGTGGC
GCTAGTTGCCTACGGTGGCAACGGTGACAGTCGAAAGGCGGCGCCGCTGGCGCCGAAAGCAGCAGCGCTCGGTCGGAGTA
TGCCCGAAACGCCTACCGGCGATGTACTGACAATCAGCAGTCCGGCATTCGCCGACGGTGCGCCGATCCCGGAACAGTAC
ACCTGCAAAGGAGCCAATATCGCGCCTCCGTTGACCTGGTCGGCGCCGTTTGGCGGCGCACTCGTTGTCGATGATCCGGA
CGCACCTCGCGAACCTTACGTCCATTGGATCGTGATCGGGATCGCCCCTGGTGCTGGCAGCACCGCCGATGGTGAGACTC
CCGGTGGCGGAATCAGCCTGCCGAACTCCAGCGGTCAGCCCGCATACACCGGCCCCTGCCCGCCGGCGGGCACCGGGACA
CACCACTACCGGTTTACCCTCTACCACCTTCCTGCCGTGCCTCCACTCGCGGGACTGGCTGGGACACAAGCGGCGCGGGT
GATCGCGCAGGCCGCCACCATGCAGGCCCGGCTCATCGGAACATACGAAGGCTGA

Upstream 100 bases:

>100_bases
AGCGGACAGGCCCGGCTCGTCGGCACATTCGAAGGCTGACGCCGCGGCATCCCTGGCGAGGTGGTCGAAACCCTGGCTTC
TCCAATTGCGCCTGGCGACA

Downstream 100 bases:

>100_bases
TCCACCCGCCATCCCACGATCCAGCGGCCCCGGGGCGATCGGGTCCTAGCAGACGCCTGTCACGCTAGCCAAAGTCTTGA
CTGATTCCAGAAAAGGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MINMESTVAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTGDVLTISSPAFADGAPIPEQY
TCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIGIAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGT
HHYRFTLYHLPAVPPLAGLAGTQAARVIAQAATMQARLIGTYEG

Sequences:

>Translated_204_residues
MINMESTVAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTGDVLTISSPAFADGAPIPEQY
TCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIGIAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGT
HHYRFTLYHLPAVPPLAGLAGTQAARVIAQAATMQARLIGTYEG
>Mature_204_residues
MINMESTVAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTGDVLTISSPAFADGAPIPEQY
TCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIGIAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGT
HHYRFTLYHLPAVPPLAGLAGTQAARVIAQAATMQARLIGTYEG

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=140, Percent_Identity=33.5714285714286, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20657; Mature: 20657

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINMESTVAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCC
DVLTISSPAFADGAPIPEQYTCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIG
CEEEECCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEECCCCCCCCCCEEEEEEE
IAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGTHHYRFTLYHLPAVPPLAGLA
ECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
GTQAARVIAQAATMQARLIGTYEG
HHHHHHHHHHHHHHHEEEEEECCC
>Mature Secondary Structure
MINMESTVAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCC
DVLTISSPAFADGAPIPEQYTCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIG
CEEEECCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEECCCCCCCCCCEEEEEEE
IAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGTHHYRFTLYHLPAVPPLAGLA
ECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
GTQAARVIAQAATMQARLIGTYEG
HHHHHHHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]