| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is priA
Identifier: 148822810
GI number: 148822810
Start: 1798688
End: 1799422
Strand: Direct
Name: priA
Synonym: TBFG_11619
Alternate gene names: 148822810
Gene position: 1798688-1799422 (Clockwise)
Preceding gene: 148822809
Following gene: 148822811
Centisome position: 40.65
GC content: 66.67
Gene sequence:
>735_bases ATGCCGCTGATACTTTTGCCCGCCGTCGACGTGGTCGAGGGTCGTGCCGTGCGCCTCGTTCAAGGGAAGGCCGGCAGCCA AACCGAGTACGGCTCAGCGGTGGATGCCGCGTTGGGCTGGCAACGCGATGGCGCCGAGTGGATCCATTTGGTGGACCTGG ATGCTGCGTTCGGCCGCGGTTCCAACCACGAACTGCTTGCCGAGGTTGTCGGCAAGCTCGACGTACAGGTTGAGCTATCC GGCGGTATTCGAGACGACGAGTCGCTGGCCGCGGCGCTGGCCACCGGATGCGCTCGGGTCAATGTGGGCACTGCTGCCCT GGAAAACCCGCAGTGGTGTGCCCGGGTGATTGGCGAGCACGGCGACCAGGTCGCCGTCGGCTTGGACGTCCAGATCATCG ACGGCGAGCATCGGTTGCGCGGACGCGGCTGGGAAACCGACGGCGGCGACCTGTGGGACGTGCTAGAACGCCTAGACAGT GAAGGATGTTCGCGGTTCGTCGTGACCGATATCACCAAGGACGGCACCCTGGGCGGCCCCAATCTGGACCTGCTGGCCGG TGTTGCCGACCGCACCGACGCCCCGGTGATCGCGTCCGGAGGTGTGTCCAGCCTCGATGACCTGCGCGCCATTGCGACTC TCACGCACCGCGGCGTCGAGGGGGCCATCGTCGGCAAGGCCCTCTACGCCCGTCGGTTCACCTTGCCGCAAGCGTTGGCC GCGGTTCGGGACTAG
Upstream 100 bases:
>100_bases CGGCGCATTGGCCGCCACCCAGTTTCATCCGGAGAAGAGTGGCGATGCCGGTGCAGCCGTACTGAGCAACTGGGTTGATG GACTTTAAAGGATACTGGTG
Downstream 100 bases:
>100_bases ATCGGCGATGCACTTGGATTCGTTGGTTGCCCCGCTGGTTGAACAGGCGTCGGCGATCCTGGATGCCGCAACGGCGCTCT TTCTCGTCGGTCATCGCGCC
Product: phosphoribosyl isomerase A
Products: NA
Alternate protein names: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELS GGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS EGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALA AVRD
Sequences:
>Translated_244_residues MPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELS GGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS EGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALA AVRD >Mature_243_residues PLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSG GIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE GCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAA VRD
Specific function: Involved in both the histidine and tryptophan biosynthetic pathways
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=35.1020408163265, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1788336, Length=241, Percent_Identity=24.4813278008299, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_MYCBP (A1KJ19)
Other databases:
- EMBL: AM408590 - RefSeq: YP_977733.1 - ProteinModelPortal: A1KJ19 - SMR: A1KJ19 - STRING: A1KJ19 - EnsemblBacteria: EBMYCT00000021912 - GeneID: 4696068 - GenomeReviews: AM408590_GR - KEGG: mbb:BCG_1641 - eggNOG: COG0106 - GeneTree: EBGT00050000015857 - HOGENOM: HBG541613 - OMA: CARYVVT - ProtClustDB: PRK14024 - BioCyc: MBOV410289:BCG_1641-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR010188 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR01919
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16; =5.3.1.24
Molecular weight: Translated: 25632; Mature: 25501
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: ACT_SITE 11-11 ACT_SITE 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRG CCEEEECCCCHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEHHHCCC SNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEH CCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHCC GDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGP CCEEEEEEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC NLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALA CHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH AVRD HHCC >Mature Secondary Structure PLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRG CEEEECCCCHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEHHHCCC SNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEH CCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHEEECCHHHCCCHHHHHHHHHCC GDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGP CCEEEEEEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC NLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALA CHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH AVRD HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA