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The map label for this gene is 148822795

Identifier: 148822795

GI number: 148822795

Start: 1783832

End: 1784554

Strand: Reverse

Name: 148822795

Synonym: TBFG_11604

Alternate gene names: NA

Gene position: 1784554-1783832 (Counterclockwise)

Preceding gene: 148822796

Following gene: 148822791

Centisome position: 40.33

GC content: 67.5

Gene sequence:

>723_bases
GTGCTAGCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATGCGGC
CGCCATCGACCGCGACACCCGCAGCCAAGCCCAACGCAACCACGACGGGCTGCTGGCCGGGCTGCGCGCGCTGATCGCCT
CCGGGAAACTGGGCCAACACAACGGTCTTCCCGTCTCGATCGTGGTCACCACCACCCTGACCGACCTGCAAACCGGCGCC
GGCAAGGGCTTCACCGGCGGCGGCACCCTGCTACCCATGGCCGATGTGATCCGCATGACCAGCCACGCCCACCACTACTC
CCCCGCAAGCGGGAGGTACCCCCAGGCGATCTTCGACCACGGCACACCCCTGGCGCTGTATCACACCAAACGCCTAGCCT
CCCCGGCCCAGCGGATCATGCTGTTCGCCAACGACCGCGGCTGCACCAAACCCGGCTGTGACGCACCGGCCTACCACAGC
CAAGCCCACCACGTCACCGCCTGGACCAGCACCGGACGCACCGACATCACCGACCTCACCCTGGCCTGCGACCCCGACAA
CCGACTCGCCGAAAAAGGCTGGACCACCCACAAAAACACCCACGGCCACACCGAATGGCTACCACCACCCCACCTCGACC
ACGGCCAACCCCGCACCAACACCTTCCACCACCACGAGAAGCTGCTACGCCACAACGACGAGGACAACCACGACGATCCG
TGA

Upstream 100 bases:

>100_bases
CGCCCGCAAACGCGGCATCACCCTGAGCAACCAGCAATACGACGGCATGTCACGGCTAAGTGGCTACCTGACCCCCCAAG
CGCGGGCCACCTTTGAAGCC

Downstream 100 bases:

>100_bases
GAATCGCCGCCCGCGAAGATCTTTGGACATCCCCACATCGACGTGCGTCCTCGCCACCTGGCCAGCACCCGCCCGAACCC
GCGAGCTGGCCATTAAGACG

Product: REP13E12 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGA
GKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHS
QAHHVTAWTSTGRTDITDLTLACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHHEKLLRHNDEDNHDDP

Sequences:

>Translated_240_residues
MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGA
GKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHS
QAHHVTAWTSTGRTDITDLTLACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHHEKLLRHNDEDNHDDP
>Mature_240_residues
MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGA
GKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHS
QAHHVTAWTSTGRTDITDLTLACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHHEKLLRHNDEDNHDDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 26028; Mature: 26028

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQH
CCCCCCCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
NGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDH
CCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
GTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITDLT
CCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
LACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHHEKLLRHNDEDNHDDP
EEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQH
CCCCCCCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
NGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDH
CCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
GTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITDLT
CCCEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
LACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHHEKLLRHNDEDNHDDP
EEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]