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The map label for this gene is iap [H]

Identifier: 148822789

GI number: 148822789

Start: 1778566

End: 1779315

Strand: Reverse

Name: iap [H]

Synonym: TBFG_11598

Alternate gene names: 148822789

Gene position: 1779315-1778566 (Counterclockwise)

Preceding gene: 148822791

Following gene: 148822788

Centisome position: 40.22

GC content: 68.0

Gene sequence:

>750_bases
GTGAAGTCACGTGCTGAGGCACACACCACCCGAGAGTGCCAAGGAGGTTACAACCCCATGAAACGCAGCATGAAAAGCGG
CTCCTTCGCGATCGGTCTGGCAATGATGCTCGCCCCGATGGTGGCCGCGCCCGGTCTTGCGGCCGCAGACCCGGCCACGC
GGCCGGTGGATTATCAACAGATCACCGACGTCGTGATCGCGCGCGGGCTGTCGCAGCGCGGCGTGCCGTTCTCCTGGGCC
GGCGGCGGCATCAGCGGCCCCACGCGCGGCACCGGTACCGGCATCAACACCGTCGGGTTCGACGCCTCCGGTTTGATCCA
GTACGCCTATGCCGGTGCCGGGCTAAAGCTGCCGCGTTCTTCCGGCCAGATGTACAAGGTTGGGCAAAAGGTCCTGCCGC
AGCAAGCGCGCAAGGGCGACCTGATCTTCTACGGCCCCGAAGGCACGCAAAGCGTCGCGTTATACCTCGGGAAGGGCCAG
ATGCTGGAGGTGGGCGACGTCGTCCAGGTTTCGCCGGTGCGCACCAACGGCATGACGCCTTACCTGGTCCGGGTTCTCGG
GACCCAGCCGACGCCCGTCCAACAGGCGCCGGTCCAGCCAGCGCCGGTCCAGCAAGCGCCCGTCCAGCAAGCGCCCGTCC
AACAGGCGCCCGTCCAACAGGCGCCGGTCCAACAGGCGCCGGTCCAGCAAGCGCCCGTCCAGCAAGCGCCCGTCCAGCCG
CCTCCCTTCGGCACCGCGCGCTCACGCTAA

Upstream 100 bases:

>100_bases
CTGGTGGATCTGGCCAGCTATGGACGCGGCCGGCATCTGTTGTCAAAGTGTCTGTAGTGATTGGTGTGAATAAAGTGACT
TCCGGCTGGAATGGCAGACG

Downstream 100 bases:

>100_bases
CGGTCCCGCTTGCTTTCTCGCCTCCCAAACCCGCCTCCTGCTTCCCGCTGCTCAGCGCGCGAAGCAGGAGGCTGGTTTGG
GTAAATTAACTGTCAACCAT

Product: inv protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKSRAEAHTTRECQGGYNPMKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWA
GGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQ
MLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQP
PPFGTARSR

Sequences:

>Translated_249_residues
MKSRAEAHTTRECQGGYNPMKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWA
GGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQ
MLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQP
PPFGTARSR
>Mature_249_residues
MKSRAEAHTTRECQGGYNPMKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQITDVVIARGLSQRGVPFSWA
GGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQ
MLEVGDVVQVSPVRTNGMTPYLVRVLGTQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQP
PPFGTARSR

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 26083; Mature: 26083

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRAEAHTTRECQGGYNPMKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQ
CCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
ITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRS
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
SGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTP
CCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCH
YLVRVLGTQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPFGTARSR
CCCCCCCCC
>Mature Secondary Structure
MKSRAEAHTTRECQGGYNPMKRSMKSGSFAIGLAMMLAPMVAAPGLAAADPATRPVDYQQ
CCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
ITDVVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRS
HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
SGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLEVGDVVQVSPVRTNGMTP
CCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCH
YLVRVLGTQPTPVQQAPVQPAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQQAPVQP
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPFGTARSR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2111287; 1459966; 11679669 [H]