Click here to switch to the map view.

The map label for this gene is frdC [H]

Identifier: 148822777

GI number: 148822777

Start: 1764813

End: 1765193

Strand: Direct

Name: frdC [H]

Synonym: TBFG_11586

Alternate gene names: 148822777

Gene position: 1764813-1765193 (Clockwise)

Preceding gene: 148822776

Following gene: 148822778

Centisome position: 39.89

GC content: 60.1

Gene sequence:

>381_bases
ATGAGCGCCTATCGCCAGCCGGTCGAAAGATACTGGTGGGCGAGGCGGCGTTCTTACCTGCGATTCATGCTTCGCGAAAT
CAGTTGCATCTTCGTGGCCTGGTTTGTTCTCTATCTGGTGCTGGTATTGCGCGCCGTTGGCGCGGGCGGGAATTCCTACC
AGCGGTTTTTGGACTTCAGCGCCAATCCGGTTGTCGTAGTGCTGAACGTCGTCGCGTTGAGTTTCCTGCTGCTGCATGCT
GTTACCTGGTTCGGATCGGCACCGCGCGCGATGGTGATTCAGGTTCGCGGCCGCCGGGTACCCGCTCGCGCGGTCCTTGC
TGGGCACTACGCGGCATGGCTGGTGGTTTCGGTGATCGTTGCCTGGATGGTGCTGTCATGA

Upstream 100 bases:

>100_bases
CTTGTCCGAAAGGCGTCGATCCTGCCGGCGCGATCCAGCGCTACAAGCTGACCGCGGCCACGCACGCGCTGAAGAAGTTG
CTGTTCCCTTGGGGGGGCGG

Downstream 100 bases:

>100_bases
CTCCCTCGACATCGGATGCCAGGTCGCGCCGACGCTCGGCGGAGCCCTTCCTGTGGCTGCTGTTCAGCGCCGGGGGCATG
GTCACCGCCCTGGTTGCGCC

Product: fumarate reductase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFSANPVVVVLNVVALSFLLLHA
VTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVAWMVLS

Sequences:

>Translated_126_residues
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFSANPVVVVLNVVALSFLLLHA
VTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVAWMVLS
>Mature_125_residues
SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFSANPVVVVLNVVALSFLLLHAV
TWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIVAWMVLS

Specific function: Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane [H]

COG id: COG3029

COG function: function code C; Fumarate reductase subunit C

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frdC family [H]

Homologues:

Organism=Escherichia coli, GI1790595, Length=124, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003510
- ProDom:   PD015900 [H]

Pfam domain/function: PF02300 Fumarate_red_C [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14417; Mature: 14286

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AWMVLS
HHHHCC
>Mature Secondary Structure 
SAYRQPVERYWWARRRSYLRFMLREISCIFVAWFVLYLVLVLRAVGAGGNSYQRFLDFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
ANPVVVVLNVVALSFLLLHAVTWFGSAPRAMVIQVRGRRVPARAVLAGHYAAWLVVSVIV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AWMVLS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA