| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148822734
Identifier: 148822734
GI number: 148822734
Start: 1705932
End: 1707230
Strand: Direct
Name: 148822734
Synonym: TBFG_11543
Alternate gene names: NA
Gene position: 1705932-1707230 (Clockwise)
Preceding gene: 148822733
Following gene: 148822735
Centisome position: 38.56
GC content: 68.59
Gene sequence:
>1299_bases ATGTACGAGAGACGGCATGAGCGCGGAATGTGCGACCGTGCCGTCGAGATGACCGACGTCGGCGCTACGGCAGCCCCCAC CGGACCTATCGCGCGGGGCAGCGTCGCTCGGGTCGGCGCGGCGACCGCGTTGGCCGTTGCCTGCGTCTACACGGTCATCT ATCTGGCGGCCCGCGACCTACCCCCGGCTTGTTTTTCGATATTCGCGGTGTTTTGGGGGGCGCTCGGCATTGCCACCGGC GCCACCCACGGCCTCCTGCAAGAAACGACCCGCGAGGTCCGCTGGGTGCGCTCCACCCAAATAGTTGCGGGCCATCGTAC CCATCCGCTGCGGGTGGCCGGGATGATTGGCACCGTCGCGGCCGTCGTAATTGCGGGTAGCTCACCGCTGTGGAGCCGAC AGCTATTCGTCGAGGGGCGCTGGCTGTCCGTGGGGCTACTCAGCGTTGGGGTGGCCGGGTTCTGCGCGCAGGCGACCCTG CTGGGCGCGCTGGCCGGCGTCGACCGGTGGACACAGTACGGGTCACTGATGGTGACCGACGCGGTCATCCGGTTGGCGGT CGCCGCGGCAGCGGTTGTGATCGGATGGGGTCTGGCCGGGTACTTGTGGGCCGCCACCGCGGGAGCGGTGGCGTGGCTGC TCATGCTGATGGCCTCGCCCACCGCGCGCAGCGCGGCCAGCCTGCTGACGCCCGGGGGAATCGCCACGTTCGTGCGCGGT GCCGCTCATTCGATAACCGCCGCGGGTGCCAGCGCGATTCTGGTAATGGGTTTCCCAGTGTTGCTCAAAGTGACCTCCGA CCAGTTAGGGGCAAAGGGCGGAGCGGTCATCCTGGCTGTGACCTTGACGCGTGCGCCGCTTCTGGTCCCACTGAGCGCGA TGCAAGGCAACCTGATCGCGCATTTCGTCGACCGGCGCACCCAACGGCTTCGGGCGCTGATCGCACCGGCGCTGGTCGTC GGCGGCATCGGTGCGGTCGGGATGTTGGCCGCAGGGCTTACCGGTCCCTGGTTGCTGCGTGTTGGATTCGGCCCCGACTA CCAAACTGGCGGGGCGTTGCTGGCCTGGTTGACGGCAGCGGCGGTAGCTATCGCCATGCTGACGCTGACCGGCGCCGCCG CGGTCGCGGCCGCACTGCACCGGGCGTATTTGCTGGGCTGGGTCAGCGCGACGGTGGCGTCGACGCTGTTGCTGCTGCTG CCGATGCCGCTGGAGACGCGCACCGTGATCGCGCTGTTGTTCGGTCCAACGGTGGGAATCGCCATCCATGTGGCCGCGTT GGCGCGGCGACCCGACTGA
Upstream 100 bases:
>100_bases GGATCACAACCGACCCCATCCAGTCGTTGCCAGGCATGCGTACTCTCGACCTCGGTTGCTGGCCAGCGGTGATACACAGC TCCCCGCCAGTGGACGTGAC
Downstream 100 bases:
>100_bases TTTGTGCCCCAGGTCGACAAATCACGCCGTCTCGTCAGTGAGCACTCCGTCCTCGGGTCCGATCCTTCCAGGAGACGTTG CAACCTGATTTGGCTCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATG ATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATL LGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRG AAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIAHFVDRRTQRLRALIAPALVV GGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLL PMPLETRTVIALLFGPTVGIAIHVAALARRPD
Sequences:
>Translated_432_residues MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATG ATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATL LGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRG AAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIAHFVDRRTQRLRALIAPALVV GGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLL PMPLETRTVIALLFGPTVGIAIHVAALARRPD >Mature_432_residues MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATG ATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATL LGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRG AAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIAHFVDRRTQRLRALIAPALVV GGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLL PMPLETRTVIALLFGPTVGIAIHVAALARRPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3630 and M.bovis Mb3654
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1510_MYCTU (P71789)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - EMBL: AE000516 - PIR: A70714 - RefSeq: NP_216026.1 - RefSeq: NP_336011.1 - RefSeq: NP_336012.1 - ProteinModelPortal: P71789 - EnsemblBacteria: EBMYCT00000003026 - EnsemblBacteria: EBMYCT00000071026 - GeneID: 886466 - GeneID: 924401 - GeneID: 924403 - GenomeReviews: AL123456_GR - KEGG: mtu:Rv1510 - TIGR: MT1558 - TIGR: MT1560 - TubercuList: Rv1510 - GeneTree: EBGT00050000015677 - HOGENOM: HBG565044 - OMA: TQETTRA - ProtClustDB: CLSK871943
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44294; Mature: 44294
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x197db598)-; HASH(0x18351e98)-; HASH(0x1a56dcc4)-; HASH(0x1a52c188)-; HASH(0x1713fa1c)-; HASH(0x180e046c)-; HASH(0x1a892eec)-; HASH(0x1a751644)-; HASH(0x1a68e010)-; HASH(0x1a704b8c)-; HASH(0x19a540bc)-; HASH(0x19e4b9f0)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDL CCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVA CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH AVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTD HHHEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH AAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIA HHHHHHHCCHHHHHHHCCHHHEEECCHHCCCCCCEEEEEEEECCCCCEEEHHHHCCHHHH HFVDRRTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHH AVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH AIHVAALARRPD HHHHHHHHCCCH >Mature Secondary Structure MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDL CCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVA CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH AVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTD HHHEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH AAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLVPLSAMQGNLIA HHHHHHHCCHHHHHHHCCHHHEEECCHHCCCCCCEEEEEEEECCCCCEEEHHHHCCHHHH HFVDRRTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTGGALLAWLTAA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHH AVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH AIHVAALARRPD HHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036