| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822672
Identifier: 148822672
GI number: 148822672
Start: 1642932
End: 1644230
Strand: Direct
Name: 148822672
Synonym: TBFG_11481
Alternate gene names: NA
Gene position: 1642932-1644230 (Clockwise)
Preceding gene: 148822670
Following gene: 148822674
Centisome position: 37.13
GC content: 63.82
Gene sequence:
>1299_bases GTGCACAGTGCACATTCGCCCTACTATCGGCTCGTGGCATTGCGGGAAACCTCACCGCGAATACATGAGCTGATCCGCGA GGCAGCGCGAATCGCCCTCAACCCGACCCAGGAATGGCTCGACGAATTCGACCGTGCCATTCTGGCCGCCAACCCATCCA TCGCTGCCGACCCCGCCCTGGCCACCGTTGTCAAGCGTTCCAATCGGGCGCATCTCATCCATTTCGCGGCCGCCAACCTG CGCAATCCCGGCGCCCCGGTGCCCGCGAACCTTGGTCCCGAGCCGCTGCGCATGGCCCGTGATCTCGTGCGCGTCGGTTT AGATGCCTTGGCCCTCGACATCTACCGCATCGGACAAAACGTGGCCTGGCGGCGCTGGACGGACATCGCGTTCGGACTGA CCTCCGACCCCGACGAGTTGCACGAATTACTGGATGTGCCATTTCGGACAGCCAACGAGTTCGTCGACACCACCCTTGCG GGCATCACCACCGAGATGCAATTGGAACGCGACAAGCTCACCCGCGACGTTCCTGCCGAACGCCGCAAAATCGTCCAGCT GCTCATCGACGGTGCCCCCATCAGCCGTGAGCACGCCGAAGCGCGATTGGGCTACCCTCTCGACCGATCCCACACCGCCG CCGTCATCTGGGGTGACCAGGCCCAGGGCGACCACAGCCACCTGGACCGAGTCGCCGACGCGTTCGGCCATGCCGGCGGA TGCCCGCACCCGCTGGTCGTGGTAGCCGGCGCCGCGACTCGCTGGGTGTGGGTAAAAGACGCCCCCGGGTTTGACATCGA CCTGATTCACGAGGTGCTCCATGACATACCCGACGCGCGTATCGCCATCGGGGCCACCGCGCCGGGAATCGAGGGGTTCC GGCGCAGCCACCGAGACGCACTCACCACCGCTCGGATGATTATCCGGCTGGAATCACCGCACCGAGTCGCCTTTTTCACC GACGTCGAGATGGTCGCGTTGCTCACCGAAAACGCCGAGGGTGCCGACGACTTCATCCAACGCACCCTCGGAAACCTCGA GTCGGCCAGCCCGGCTCTGAAAACGACGCTATTGACCTTCATCAACCAGCAGTGCAACGCTTCTCGGGCCGCGAGACTTC TCTTCACCCACCGCAACACCTTGATGAACCGACTCGAGACCGCGCAACGACTTCTGCCCCGCCCTCTCGCCGACACCACC ATTCACGTCGCCGTCGCACTCGAAGCCCAGCAGTGGCGGGAGAAGCAAACCAGCGATCCTCCGGCAAAGAAAGAGTCGAA TGGCACCAAGATGCGTTAG
Upstream 100 bases:
>100_bases CCCCTGCCCCTTCGGCAGGTCACACTCCTGCCAGATAAGGGTCGCGCCGCCACCTTGTCCGATTCCAGGTCAAAATCCCC ATAACCAGCACGAATCTGCT
Downstream 100 bases:
>100_bases CAAGACAGCGCAGCACAGACCGCTACGCTACGGCAGCAGCACGACCGAGCCGACCGTCTTGCGAGCCTCCAGGTCCTGAT GGGCGCGCAAGGCGTCGGCC
Product: transcriptional activator protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MHSAHSPYYRLVALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAHLIHFAAANL RNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLA GITTEMQLERDKLTRDVPAERRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGG CPHPLVVVAGAATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLESPHRVAFFT DVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTT IHVAVALEAQQWREKQTSDPPAKKESNGTKMR
Sequences:
>Translated_432_residues MHSAHSPYYRLVALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAHLIHFAAANL RNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLA GITTEMQLERDKLTRDVPAERRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGG CPHPLVVVAGAATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLESPHRVAFFT DVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTT IHVAVALEAQQWREKQTSDPPAKKESNGTKMR >Mature_432_residues MHSAHSPYYRLVALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPALATVVKRSNRAHLIHFAAANL RNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQNVAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLA GITTEMQLERDKLTRDVPAERRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGG CPHPLVVVAGAATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDALTTARMIIRLESPHRVAFFT DVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTFINQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTT IHVAVALEAQQWREKQTSDPPAKKESNGTKMR
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47936; Mature: 47936
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSAHSPYYRLVALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPAL CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCHHH ATVVKRSNRAHLIHFAAANLRNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQN HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERDKLTRDVPAE CCHHHHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEHHHHHHCCCCHH RRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGG HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC CPHPLVVVAGAATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDA CCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH LTTARMIIRLESPHRVAFFTDVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTF HHHHHHHEEECCCCEEEEEECHHEEEHHHCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHH INQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQWREKQTSDP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCCC PAKKESNGTKMR CCCCCCCCCCCC >Mature Secondary Structure MHSAHSPYYRLVALRETSPRIHELIREAARIALNPTQEWLDEFDRAILAANPSIAADPAL CCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCHHH ATVVKRSNRAHLIHFAAANLRNPGAPVPANLGPEPLRMARDLVRVGLDALALDIYRIGQN HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VAWRRWTDIAFGLTSDPDELHELLDVPFRTANEFVDTTLAGITTEMQLERDKLTRDVPAE CCHHHHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEHHHHHHCCCCHH RRKIVQLLIDGAPISREHAEARLGYPLDRSHTAAVIWGDQAQGDHSHLDRVADAFGHAGG HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC CPHPLVVVAGAATRWVWVKDAPGFDIDLIHEVLHDIPDARIAIGATAPGIEGFRRSHRDA CCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH LTTARMIIRLESPHRVAFFTDVEMVALLTENAEGADDFIQRTLGNLESASPALKTTLLTF HHHHHHHEEECCCCEEEEEECHHEEEHHHCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHH INQQCNASRAARLLFTHRNTLMNRLETAQRLLPRPLADTTIHVAVALEAQQWREKQTSDP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHCCCCC PAKKESNGTKMR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA