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The map label for this gene is PE_PGRS20 [H]

Identifier: 148822660

GI number: 148822660

Start: 1622571

End: 1624046

Strand: Reverse

Name: PE_PGRS20 [H]

Synonym: TBFG_11469

Alternate gene names: 148822660

Gene position: 1624046-1622571 (Counterclockwise)

Preceding gene: 148822662

Following gene: 148822658

Centisome position: 36.71

GC content: 76.02

Gene sequence:

>1476_bases
ATGTCGAACGTGATGGTAGTCCCGGGAATGTTGTCAGCGGCGGCAGCGGATGTGGCGAGCATCGGTGCGGCGCTTAGCGC
GGCCAACGGAGCCGCGGCACCCACGACGGCTGGTGTCCTGGCCGCCGGGGCCGATGAGGTGTCGGCGGCCATCGCGTCGT
TGTTTTCTGGCTACGCCCGCGACTATCAGGCGCTCAGTGCCCAAATGGCCAGATTTCATCAACAGTTCGTGCAGGCCTTA
ACCGCGAGCGTGGGCTCGTATGCCGCCGCCGAGGCCGCCAACGCCTCCCCCTTGCAGGCCCTCGAACAACAGGTGCTCGC
GGCCATCAACGCGCCCACCCAGACACTGCTGGGGCGTCCGCTGATCGGCAACGGCGCCGACGGGCTGCCCGGTCAAAACG
GTGGGGCCGGCGGGTTGCTGTGGGGCAACGGCGGGAACGGCGGAGCCGGCGACGCCGCCCACCCCAACGGCGGCAACGGC
GGGGATGCCGGAATGTTCGGTAACGGCGGGGCCGGCGGTGCCGGTTACAGCCCGGCGGCCGGAACCGGCGCGGCCGGTGG
AGCCGGCGGCGCCGGTGGAGCCGGTGGCTGGCTAAGCGGCAACGGCGGCGCCGGCGGCAACGGCGGTACTGGCGCCAGCG
GCGCCGACGGCGGCGGCGGCCTCCCCCCCGTCCCCGCCAGCCCTGGCGGTAACGGCGGTGGCGGTGATGCCGGTGGTGCT
GCTGGGATGTTCGGCACCGGCGGCGCCGGTGGGACCGGCGGGGACGGCGGCGCCGGCGGTGCCGGCGACAGTCCTAACAG
CGGTGCCAACGGCGCCCGTGGCGGCGACGGCGGCAACGGCGCTGCGGGTGGGGCTGGTGGCCGGCTGTTCGGCAATGGCG
GCGCCGGCGGCAACGGCGGCACCGCTGGCCAAGGTGGCGACGGCGGCACGGCGCTAGGCGCTGGCGGCATCGGCGGCGAC
GGCGGCACCGGCGGCGCCGGTGGTACTGGCGGCACAGCTGGCATCGGCGGCAGCAGCGCCGGCGCCGGCGGCGCCGGCGG
CGACGGCGGCGCCGGCGGCACCGGCGGCGGCAGCTCAATGATCGGCGGCAAAGGCGGTACCGGCGGCAACGGCGGCGTCG
GTGGCACCGGCGGCGCCAGCGCATTGACCATCGGCAATGGCAGCAGCGCCGGCGCCGGCGGCGCTGGCGGCGCAGGCGGC
ACCGGCGGCACCGGCGGCTATATCGAAAGCCTCGACGGCAAAGGCCAAGCCGGCAACGGCGGCAACGGCGGCAACGGCGC
CGCGGGTGGGGCAGGCGGAGGCGGCACCGGCGCCGGCGGTAACGGCGGCGCCGGCGGCAACGGCGGTGACGGCGGGCCCA
GCCAAGGTGGCGGCAATCCCGGCTTTGGCGGCGACGGCGGCACCGGCGGACCTGGCGGCGTCGGTGTGCCCGACGGGATC
GGCGGCGCCAATGGCGCGCAAGGAAAGCACGGGTGA

Upstream 100 bases:

>100_bases
CAGTCTAGTGCGGCAACCTAGCAGCTAGTTGAGCTCAGAAATGGTAAGCATGTCGATTGTTTTGCGTCGCAACGATGGCA
CCAGGTTTTAGACTGCAGCG

Downstream 100 bases:

>100_bases
CCGGTCAGGCCGACTAACCACTGTTTCTGAGCGCGCTGGCCAGCCCGGTCATGGTCAGCAGAATCCTGCGCTGCACCAAG
TCGTAATCGGCAATGAGCTA

Product: PE-PGRS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSNVMVVPGMLSAAAADVASIGAALSAANGAAAPTTAGVLAAGADEVSAAIASLFSGYARDYQALSAQMARFHQQFVQAL
TASVGSYAAAEAANASPLQALEQQVLAAINAPTQTLLGRPLIGNGADGLPGQNGGAGGLLWGNGGNGGAGDAAHPNGGNG
GDAGMFGNGGAGGAGYSPAAGTGAAGGAGGAGGAGGWLSGNGGAGGNGGTGASGADGGGGLPPVPASPGGNGGGGDAGGA
AGMFGTGGAGGTGGDGGAGGAGDSPNSGANGARGGDGGNGAAGGAGGRLFGNGGAGGNGGTAGQGGDGGTALGAGGIGGD
GGTGGAGGTGGTAGIGGSSAGAGGAGGDGGAGGTGGGSSMIGGKGGTGGNGGVGGTGGASALTIGNGSSAGAGGAGGAGG
TGGTGGYIESLDGKGQAGNGGNGGNGAAGGAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFGGDGGTGGPGGVGVPDGI
GGANGAQGKHG

Sequences:

>Translated_491_residues
MSNVMVVPGMLSAAAADVASIGAALSAANGAAAPTTAGVLAAGADEVSAAIASLFSGYARDYQALSAQMARFHQQFVQAL
TASVGSYAAAEAANASPLQALEQQVLAAINAPTQTLLGRPLIGNGADGLPGQNGGAGGLLWGNGGNGGAGDAAHPNGGNG
GDAGMFGNGGAGGAGYSPAAGTGAAGGAGGAGGAGGWLSGNGGAGGNGGTGASGADGGGGLPPVPASPGGNGGGGDAGGA
AGMFGTGGAGGTGGDGGAGGAGDSPNSGANGARGGDGGNGAAGGAGGRLFGNGGAGGNGGTAGQGGDGGTALGAGGIGGD
GGTGGAGGTGGTAGIGGSSAGAGGAGGDGGAGGTGGGSSMIGGKGGTGGNGGVGGTGGASALTIGNGSSAGAGGAGGAGG
TGGTGGYIESLDGKGQAGNGGNGGNGAAGGAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFGGDGGTGGPGGVGVPDGI
GGANGAQGKHG
>Mature_490_residues
SNVMVVPGMLSAAAADVASIGAALSAANGAAAPTTAGVLAAGADEVSAAIASLFSGYARDYQALSAQMARFHQQFVQALT
ASVGSYAAAEAANASPLQALEQQVLAAINAPTQTLLGRPLIGNGADGLPGQNGGAGGLLWGNGGNGGAGDAAHPNGGNGG
DAGMFGNGGAGGAGYSPAAGTGAAGGAGGAGGAGGWLSGNGGAGGNGGTGASGADGGGGLPPVPASPGGNGGGGDAGGAA
GMFGTGGAGGTGGDGGAGGAGDSPNSGANGARGGDGGNGAAGGAGGRLFGNGGAGGNGGTAGQGGDGGTALGAGGIGGDG
GTGGAGGTGGTAGIGGSSAGAGGAGGDGGAGGTGGGSSMIGGKGGTGGNGGVGGTGGASALTIGNGSSAGAGGAGGAGGT
GGTGGYIESLDGKGQAGNGGNGGNGAAGGAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFGGDGGTGGPGGVGVPDGIG
GANGAQGKHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000084 [H]

Pfam domain/function: PF00934 PE [H]

EC number: NA

Molecular weight: Translated: 40810; Mature: 40679

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVMVVPGMLSAAAADVASIGAALSAANGAAAPTTAGVLAAGADEVSAAIASLFSGYAR
CCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH
DYQALSAQMARFHQQFVQALTASVGSYAAAEAANASPLQALEQQVLAAINAPTQTLLGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCC
LIGNGADGLPGQNGGAGGLLWGNGGNGGAGDAAHPNGGNGGDAGMFGNGGAGGAGYSPAA
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTGAAGGAGGAGGAGGWLSGNGGAGGNGGTGASGADGGGGLPPVPASPGGNGGGGDAGGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGMFGTGGAGGTGGDGGAGGAGDSPNSGANGARGGDGGNGAAGGAGGRLFGNGGAGGNGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
TAGQGGDGGTALGAGGIGGDGGTGGAGGTGGTAGIGGSSAGAGGAGGDGGAGGTGGGSSM
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IGGKGGTGGNGGVGGTGGASALTIGNGSSAGAGGAGGAGGTGGTGGYIESLDGKGQAGNG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNGGNGAAGGAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFGGDGGTGGPGGVGVPDGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGANGAQGKHG
CCCCCCCCCCC
>Mature Secondary Structure 
SNVMVVPGMLSAAAADVASIGAALSAANGAAAPTTAGVLAAGADEVSAAIASLFSGYAR
CCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH
DYQALSAQMARFHQQFVQALTASVGSYAAAEAANASPLQALEQQVLAAINAPTQTLLGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCC
LIGNGADGLPGQNGGAGGLLWGNGGNGGAGDAAHPNGGNGGDAGMFGNGGAGGAGYSPAA
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTGAAGGAGGAGGAGGWLSGNGGAGGNGGTGASGADGGGGLPPVPASPGGNGGGGDAGGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGMFGTGGAGGTGGDGGAGGAGDSPNSGANGARGGDGGNGAAGGAGGRLFGNGGAGGNGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
TAGQGGDGGTALGAGGIGGDGGTGGAGGTGGTAGIGGSSAGAGGAGGDGGAGGTGGGSSM
CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IGGKGGTGGNGGVGGTGGASALTIGNGSSAGAGGAGGAGGTGGTGGYIESLDGKGQAGNG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GNGGNGAAGGAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFGGDGGTGGPGGVGVPDGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGANGAQGKHG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]