| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148822419
Identifier: 148822419
GI number: 148822419
Start: 1350700
End: 1352388
Strand: Reverse
Name: 148822419
Synonym: TBFG_11228
Alternate gene names: NA
Gene position: 1352388-1350700 (Counterclockwise)
Preceding gene: 148822427
Following gene: 148822418
Centisome position: 30.57
GC content: 70.52
Gene sequence:
>1689_bases ATGCGCGTCTGGAAACACGTGGAGGCGGCCGTCGACAGTCCGGATCGGTGCGGGGTGGTGCTGGTCGGGCCACACGGCGT CGGCAAGACGCTGCTGGCGCAACTGGCTGCCGAGCAGGTCATGTCCGAGGACGGCAGGAGCGGCCGGGCTCGCTGGGTGG TGGGAACCGCTCCAGGGCGGGCCATCCCGTTCGGCGCTTTCCGCCATTTGATCAGCCTGCCCGCCTCCGGAGCCGACATT GGGCGGCCCGCGGCGCTGCTGCGGGCGGCGCGTAGTTCCCTGACCGGTGATGCTGGCGATCTGCTGCTGGTGGTCGACGA CGCGCACAACCTGGATCCGCTGTCGGCCACCTTGGTGTACCAGCTGGCGCGGGCCGGGGCGGCGCGGCTGGTGGTCACCG TCGCCTCGGAGGCCGAGCCACCGGACGCTATAGCTGCGCTCTGGTCCGATGACCTGCTCACCCGGGTCGCCATCGAGCCG CTCGACAGGGCCCAAACCGCGGCGTTCGTGGAGTCGGCGCTGGACGCGACACTGGACGTCGCCGACGCCGACGAGCTCTT TCGGCGCAGCCTTGGCAACCCGTTGTATCTGCGCCACCTCATCGACGGCGGTGGTCTCGAACACGTGGACGGCCGGTGGC GCTGTCGAGACGAGGATCGTCGGCCGCTGTCCGGCGTGATCGACGAGTACCTGTGCGCCCTGCCGGAACCGGCCCGCGCC GTTGTCGACTACCTCGCCATCGCCGAACCGTTGGCGCGCACCGACCTGGTGGCCCTGGTCGGTGGCGAGCAGTTGGACAC GCTCGGCCAAGCCGAAGCCGCCGGCGCGGTGCGGGTGGGTCCCGACAGCGATACCAGCGAGATTTTTGTCGGCCATCCGC TGTACGCCGACCGCGCACGCGCCGTATTGACGGCCGAGCACGCGCATGCATTGCGCGTGTCGCTGGTCGCGCAGCTGGCC AAGCACCCATCCGACCATGTCAGCGATCAGTTACGGCTGTCCTCACTGGCCATCGACGTCCCCGCCAGTGCTACCCCGGC CGCGGTCACGGATGCGGCGACCGCAGCCGGGCAGGCCCTGCGGCTCGGCGACGTCCGGCTTGCCGAACGGTTGGCGCGGG CAGCGCTGGATAGGTCGGACGCCCTGGCGGCACGCCTGCCCTTGGCTTACGCACTCGGTTGGCAGGGTCGCGGTCGCGAA GCTGACGCGGTGCTGGCGGCGGTGAATCCCGCCGAATTGACCGAGACCGAGCTGATGGCCTGGGCGATACCCCGGGCGGC GAATCGGTTCTGGATGCTCAACGAGCCCGAGCGCGCCACGGCGTTTCTGCAGACGACCCGCAGCCGAGTGACCGAGCCCA CGGCCCGCAGCACCCTGGATGCGCTGGCGGCCACGTTTGCGATGAACTCCGGAAACTTGCCGCGGGCCATCACGCTGGCC ACCGAGGTGCTGTCCGGACCGGCTGCCGACGACATGGCCGTGGCCTGGGCCGCCAGCGCTGCCGCGTTATCATCGGCACG AATGGGCCGGTTCGGCGACGTTGACCGGCTGGCCGAACGGGCGTCGGCCGCCGAACATCCGGGGCTGCTGCGGTTCACCG TGGGCCTGGCTCAGATCACGTCGCTGCTGCTGGCAGGCGACGTCGCGCCGGCTCAGGAGCTGGCCAAGCGGTTCACCGAC TTCGCCTAG
Upstream 100 bases:
>100_bases CGACATACACCAGAACGTAGACCACCGATGTGAACCGCGTACATTTTTGGCCTATCCCCCGCTCGAATGTCGTTGGGCGC AACCGCCATAAAATCCGGCG
Downstream 100 bases:
>100_bases CTGCAGCAACCTGGCCGGTCCATCGGTGAAGTGTTGTTGGCGTACGTACTGATCACCAAAGGCGAATTCGGCGCCGCGGC ATCGATGCTGGAGCCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Regulatory Protein LuxR; Transcriptional Regulator; Response Regulator Receiver Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator LuxR Family; LuxR Transcriptional Regulator; AAA ATPase; Luxr Family Transcriptional Regulator
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGRAIPFGAFRHLISLPASGADI GRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVYQLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEP LDRAQTAAFVESALDATLDVADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRARAVLTAEHAHALRVSLVAQLA KHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQALRLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGRE ADAVLAAVNPAELTETELMAWAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQITSLLLAGDVAPAQELAKRFTD FA
Sequences:
>Translated_562_residues MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGRAIPFGAFRHLISLPASGADI GRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVYQLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEP LDRAQTAAFVESALDATLDVADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRARAVLTAEHAHALRVSLVAQLA KHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQALRLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGRE ADAVLAAVNPAELTETELMAWAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQITSLLLAGDVAPAQELAKRFTD FA >Mature_562_residues MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGRAIPFGAFRHLISLPASGADI GRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVYQLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEP LDRAQTAAFVESALDATLDVADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRARAVLTAEHAHALRVSLVAQLA KHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQALRLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGRE ADAVLAAVNPAELTETELMAWAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQITSLLLAGDVAPAQELAKRFTD FA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59220; Mature: 59220
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGR CCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC AIPFGAFRHLISLPASGADIGRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVY CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH QLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEPLDRAQTAAFVESALDATLDV HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC ADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA CCHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHH VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRAR HHHHHHHHHHHHHHCEEEEECCCHHHHHCCHHHCCEEEECCCCCCCCEEECCCCHHHHHH AVLTAEHAHALRVSLVAQLAKHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQAL HHEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCHH RLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGREADAVLAAVNPAELTETELMA HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEECCCCCCCCCCEEEEECCHHHHHHHHHHH WAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA HHCCHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQIT HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHH SLLLAGDVAPAQELAKRFTDFA HHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRVWKHVEAAVDSPDRCGVVLVGPHGVGKTLLAQLAAEQVMSEDGRSGRARWVVGTAPGR CCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC AIPFGAFRHLISLPASGADIGRPAALLRAARSSLTGDAGDLLLVVDDAHNLDPLSATLVY CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH QLARAGAARLVVTVASEAEPPDAIAALWSDDLLTRVAIEPLDRAQTAAFVESALDATLDV HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC ADADELFRRSLGNPLYLRHLIDGGGLEHVDGRWRCRDEDRRPLSGVIDEYLCALPEPARA CCHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHH VVDYLAIAEPLARTDLVALVGGEQLDTLGQAEAAGAVRVGPDSDTSEIFVGHPLYADRAR HHHHHHHHHHHHHHCEEEEECCCHHHHHCCHHHCCEEEECCCCCCCCEEECCCCHHHHHH AVLTAEHAHALRVSLVAQLAKHPSDHVSDQLRLSSLAIDVPASATPAAVTDAATAAGQAL HHEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCHH RLGDVRLAERLARAALDRSDALAARLPLAYALGWQGRGREADAVLAAVNPAELTETELMA HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEECCCCCCCCCCEEEEECCHHHHHHHHHHH WAIPRAANRFWMLNEPERATAFLQTTRSRVTEPTARSTLDALAATFAMNSGNLPRAITLA HHCCHHCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH TEVLSGPAADDMAVAWAASAAALSSARMGRFGDVDRLAERASAAEHPGLLRFTVGLAQIT HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHH SLLLAGDVAPAQELAKRFTDFA HHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA