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The map label for this gene is slyA [C]

Identifier: 148822258

GI number: 148822258

Start: 1176156

End: 1176602

Strand: Direct

Name: slyA [C]

Synonym: TBFG_11067

Alternate gene names: 148822258

Gene position: 1176156-1176602 (Clockwise)

Preceding gene: 148822255

Following gene: 148822259

Centisome position: 26.58

GC content: 69.35

Gene sequence:

>447_bases
ATGGGCAAAGGGGCGGCGTTCGACGAATGCGCTTGCTACACCACCCGGCGGGCGGCCCGACAGCTCGGCCAGGCCTATGA
TCGCGCGCTGCGGCCGAGCGGGTTGACGAACACCCAATTCAGCACGCTGGCCGTGATCTCGCTGTCGGAAGGCAGCGCCG
GGATCGACCTCACGATGAGCGAGCTTGCCGCCCGCATCGGCGTTGAACGCACGACGCTAACCCGCAACCTCGAGGTGATG
AGGCGCGACGGACTGGTGCGGGTCATGGCGGGTGCCGACGCGCGGTGCAAGCGCATCGAGCTGACCGCGAAGGGCCGCGC
GGCACTGCAAAAGGCGGTGCCCCTATGGCGCGGGGTGCAGGCGGAGGTGACCGCAAGCGTCGGTGACTGGCCACGGGTGC
GACGCGACATCGCGAATCTGGGTCAGGCGGCGGAGGCGTGTCGGTGA

Upstream 100 bases:

>100_bases
GGAGCATGGTGGCGGGCGGAACCCACACTTCGGGCTAGCTCTAGGGGGCAGGGCTTTGACGGGTCTTGACAAATACGTGT
AGCTACACGAGTCTGGAGTA

Downstream 100 bases:

>100_bases
TCTTTTTTGCGCATATATGTGTAGTTACACCCAACTGAGGAGCAAATGATGGCTAGGCAGAGATTTCGTGACCAGGTGGT
GTTGATCACCGGTGCCTCCA

Product: transcriptional repressor

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator Protein; Organic Hydroperoxide Resistance Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Regulatory Protein Marr Family; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERTTLTRNLEVM
RRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGDWPRVRRDIANLGQAAEACR

Sequences:

>Translated_148_residues
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERTTLTRNLEVM
RRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGDWPRVRRDIANLGQAAEACR
>Mature_147_residues
GKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERTTLTRNLEVMR
RDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGDWPRVRRDIANLGQAAEACR

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15981; Mature: 15849

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEHH
ELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ
HHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
AEVTASVGDWPRVRRDIANLGQAAEACR
CEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEHH
ELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ
HHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
AEVTASVGDWPRVRRDIANLGQAAEACR
CEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA