| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822245
Identifier: 148822245
GI number: 148822245
Start: 1163863
End: 1164186
Strand: Reverse
Name: 148822245
Synonym: TBFG_11054
Alternate gene names: NA
Gene position: 1164186-1163863 (Counterclockwise)
Preceding gene: 148822246
Following gene: 148822244
Centisome position: 26.31
GC content: 61.42
Gene sequence:
>324_bases ATGGTGCTGAACTGGGAAGATGGCCTCAATGCCCTTGTTGCGGAAGGGATTGAGGCCATCGTGTTTCGTACTTTAGGCGA TCAGTGCTGGTTGTGGGAGTCGCTGCTGCCCGACGAGGTGCGCCGACTGCCCGAGGAACTGGCCCGGGTGGACGCATTGT TGGACGATCCGGCGTTCTTCGCCCCGTTCGTGCCGTTCTTCGACCCGCGCAGGGGCCGGCCGTCGACGCCGATGGAGGTC TATCTGCAGTTGATGTTTGTGAAGTTCCGCTACCGGCTGGGCTATGAGTCGCTGTGCCGGGAGGTGGCTGATTCGATCAC CTGA
Upstream 100 bases:
>100_bases ATTACAACGTGGCCGCACACCGGTTGGTGTGTGGCCACGTTGTTATCTGAACGACTAACTACTTCGACCTGCTAAAGTCG GCGCGTTGATCCCCGGTCGG
Downstream 100 bases:
>100_bases CGGCGGTTTTGCCGCATTGCGCTGGACGGGTCGGTGCCGCATCCGACCACATTGATGAAGCTCACCACGCGTTGCGGATC GGCGGCGATCGACGGGCTCA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; IS5 Family Transposase
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV YLQLMFVKFRYRLGYESLCREVADSIT
Sequences:
>Translated_107_residues MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV YLQLMFVKFRYRLGYESLCREVADSIT >Mature_107_residues MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV YLQLMFVKFRYRLGYESLCREVADSIT
Specific function: Unknown
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12441; Mature: 12441
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFF CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH APFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFF CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH APFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA