| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148822175
Identifier: 148822175
GI number: 148822175
Start: 1081056
End: 1081748
Strand: Reverse
Name: 148822175
Synonym: TBFG_10984
Alternate gene names: NA
Gene position: 1081748-1081056 (Counterclockwise)
Preceding gene: 148822180
Following gene: 148822174
Centisome position: 24.45
GC content: 65.22
Gene sequence:
>693_bases GTGGGCTACCCAAGGAGTCGAACCTGGCAACATTTGCAGTTTCGCCAACACCTCTTGAAGCAAATTCTTGACGTCGTAGG CTCGTGGACGATGAGCAACTCGGCGCAGCGTGACGCGAGGAACTCGCGCGACGAGTCCGCGCGTGCGTCGGACACCGACC GGATACAGATTGCGCAGTTGCTGGCCTACGCGGCCGAGCAGGGCCGCCTGCAGCTGACCGATTATGAAGACCGGCTGGCG CGGGCCTATGCGGCAACCACCTACCAGGAGCTGGATCGGCTGCGGGCCGATCTGCCGGGGGCGGCGATAGGCCCGCGCAG GGGTGGCGAATGCAATCCGGCGCCGTCCACGCTGCTGCTGGCGCTACTGGGCGGATTCGAACGACGCGGCCGCTGGAACG TGCCGAAGAAGCTGACCACGTTCACCTTGTGGGGCAGCGGGGTGCTGGATCTGCGCTACGCCGACTTCACCTCGACCGAG GTGGACATCCGTGCGTACTCGATCATGGGGGCGCAGACAATTCTGCTGCCACCCGAAGTCAACGTGGAGATCCACGGTCA CCGAGTGATGGGCGGCTTCGACCGCAAGGTGGTCGGGGAGGGCACCCGTGGCGCGCCGACGGTGAGGATCCGCGGCTTCT CGCTGTGGGGTGATGTGGGCATCAAGCGCAAACCCCGCAAGCCACGCAAATAG
Upstream 100 bases:
>100_bases CTTCAGCCGGTTCAGCGCCGCGCGCTTCTTTGCGGTCAATTCCTTGCTCATGGCTTGCCCCTAATCCCTCACCCGTTCAT GGTATCCCACCCCACTGGGG
Downstream 100 bases:
>100_bases CCGCAAATAGCAAGGTGCGCCGCCCGGTCAGCTCGATGCGGGTGAATCGCCCGCAATGTGCTCGTGTGCCATACTCCGCC GAAAGTTTGGTTCGTGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MGYPRSRTWQHLQFRQHLLKQILDVVGSWTMSNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLA RAYAATTYQELDRLRADLPGAAIGPRRGGECNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTE VDIRAYSIMGAQTILLPPEVNVEIHGHRVMGGFDRKVVGEGTRGAPTVRIRGFSLWGDVGIKRKPRKPRK
Sequences:
>Translated_230_residues MGYPRSRTWQHLQFRQHLLKQILDVVGSWTMSNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLA RAYAATTYQELDRLRADLPGAAIGPRRGGECNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTE VDIRAYSIMGAQTILLPPEVNVEIHGHRVMGGFDRKVVGEGTRGAPTVRIRGFSLWGDVGIKRKPRKPRK >Mature_229_residues GYPRSRTWQHLQFRQHLLKQILDVVGSWTMSNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLAR AYAATTYQELDRLRADLPGAAIGPRRGGECNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTEV DIRAYSIMGAQTILLPPEVNVEIHGHRVMGGFDRKVVGEGTRGAPTVRIRGFSLWGDVGIKRKPRKPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012551 [H]
Pfam domain/function: PF08044 DUF1707 [H]
EC number: NA
Molecular weight: Translated: 25847; Mature: 25716
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYPRSRTWQHLQFRQHLLKQILDVVGSWTMSNSAQRDARNSRDESARASDTDRIQIAQL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH LAYAAEQGRLQLTDYEDRLARAYAATTYQELDRLRADLPGAAIGPRRGGECNPAPSTLLL HHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH ALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTEVDIRAYSIMGAQTILLPPEV HHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEEEECCEEEEECCCC NVEIHGHRVMGGFDRKVVGEGTRGAPTVRIRGFSLWGDVGIKRKPRKPRK CEEECCEEEECCCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure GYPRSRTWQHLQFRQHLLKQILDVVGSWTMSNSAQRDARNSRDESARASDTDRIQIAQL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH LAYAAEQGRLQLTDYEDRLARAYAATTYQELDRLRADLPGAAIGPRRGGECNPAPSTLLL HHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH ALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTEVDIRAYSIMGAQTILLPPEV HHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEEEECCEEEEECCCC NVEIHGHRVMGGFDRKVVGEGTRGAPTVRIRGFSLWGDVGIKRKPRKPRK CEEECCEEEECCCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]