| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148821680
Identifier: 148821680
GI number: 148821680
Start: 573157
End: 573681
Strand: Reverse
Name: 148821680
Synonym: TBFG_10489
Alternate gene names: NA
Gene position: 573681-573157 (Counterclockwise)
Preceding gene: 148821683
Following gene: 148821679
Centisome position: 12.97
GC content: 62.29
Gene sequence:
>525_bases ATGCCGCGTTCATTCGACATGTCGGCCGACTACGAGGGCAGCGTCGAGGAGGTTCATCGGGCTTTCTACGAGGCGGACTA CTGGAAAGCCAGACTGGCCGAAACGCCGGTCGACGTCGCGACCCTTGAGTCGATACGCGTAGGTGGCGACTCCGGAGACG ACGGCACCATCGAAGTCGTCACCCTGCAGATGGTGCGCAGTCACAATCTGCCCGGCCTGGTCACACAGTTGCACCGGGGC GATCTTTCGGTACGGCGCGAGGAGACCTGGGGCCCGGTCAAGGAAGGCATCGCGACCGCGTCCATTGCGGGATCGATCGT GGACGCTCCGGTGAACTTGTGGGGCACCGCCGTGCTCTCGCCCATACCGGAGTCGGGTGGCTCCCGAATGACGCTGCAGG TCACCATCCAGGTGCGTATCCCGTTCATTGGCGGGAAGCTGGAGAGGCTTATCGGCACCCAATTAAGCCAGCTAGTGACC ATCGAACAGCGCTTCACCACGCTGTGGATCACGAACAACGTCTGA
Upstream 100 bases:
>100_bases GTCAGCGGCGCCAACGGGACCGCCTCGGCAATATGCGCACCGGCAAAGAGCGAACCGACACCGCTCCGTTTCATGGCCCG TAAGGGTAGCCTGACCTGCT
Downstream 100 bases:
>100_bases GGTGCCAGCTTGCCCGGCTCCTGCGCGCGCCGGTACGGCGCGCTCGTCGCCGGGCGCAAGCTGGATTGCCCGGCTCCTGC GCGCGCCGGTGCGGCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MPRSFDMSADYEGSVEEVHRAFYEADYWKARLAETPVDVATLESIRVGGDSGDDGTIEVVTLQMVRSHNLPGLVTQLHRG DLSVRREETWGPVKEGIATASIAGSIVDAPVNLWGTAVLSPIPESGGSRMTLQVTIQVRIPFIGGKLERLIGTQLSQLVT IEQRFTTLWITNNV
Sequences:
>Translated_174_residues MPRSFDMSADYEGSVEEVHRAFYEADYWKARLAETPVDVATLESIRVGGDSGDDGTIEVVTLQMVRSHNLPGLVTQLHRG DLSVRREETWGPVKEGIATASIAGSIVDAPVNLWGTAVLSPIPESGGSRMTLQVTIQVRIPFIGGKLERLIGTQLSQLVT IEQRFTTLWITNNV >Mature_173_residues PRSFDMSADYEGSVEEVHRAFYEADYWKARLAETPVDVATLESIRVGGDSGDDGTIEVVTLQMVRSHNLPGLVTQLHRGD LSVRREETWGPVKEGIATASIAGSIVDAPVNLWGTAVLSPIPESGGSRMTLQVTIQVRIPFIGGKLERLIGTQLSQLVTI EQRFTTLWITNNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y481_MYCTU (P64701)
Other databases:
- EMBL: BX842573 - EMBL: AE000516 - PIR: D70743 - RefSeq: NP_214995.1 - RefSeq: NP_334908.1 - EnsemblBacteria: EBMYCT00000002617 - EnsemblBacteria: EBMYCT00000069319 - GeneID: 887161 - GeneID: 923854 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0499 - KEGG: mtu:Rv0481c - TIGR: MT0499 - TubercuList: Rv0481c - GeneTree: EBGT00050000016482 - HOGENOM: HBG657504 - OMA: RRIEHSS - ProtClustDB: CLSK790546 - InterPro: IPR019639
Pfam domain/function: PF10698 DUF2505
EC number: NA
Molecular weight: Translated: 19064; Mature: 18933
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSFDMSADYEGSVEEVHRAFYEADYWKARLAETPVDVATLESIRVGGDSGDDGTIEVV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCEEEEE TLQMVRSHNLPGLVTQLHRGDLSVRREETWGPVKEGIATASIAGSIVDAPVNLWGTAVLS EEEEHHCCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCHHHCCCHHHHHHHHHC PIPESGGSRMTLQVTIQVRIPFIGGKLERLIGTQLSQLVTIEQRFTTLWITNNV CCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC >Mature Secondary Structure PRSFDMSADYEGSVEEVHRAFYEADYWKARLAETPVDVATLESIRVGGDSGDDGTIEVV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCEEEEE TLQMVRSHNLPGLVTQLHRGDLSVRREETWGPVKEGIATASIAGSIVDAPVNLWGTAVLS EEEEHHCCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCHHHCCCHHHHHHHHHC PIPESGGSRMTLQVTIQVRIPFIGGKLERLIGTQLSQLVTIEQRFTTLWITNNV CCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036