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The map label for this gene is 148821671

Identifier: 148821671

GI number: 148821671

Start: 565892

End: 566596

Strand: Reverse

Name: 148821671

Synonym: TBFG_10480

Alternate gene names: NA

Gene position: 566596-565892 (Counterclockwise)

Preceding gene: 148821678

Following gene: 148821670

Centisome position: 12.81

GC content: 62.7

Gene sequence:

>705_bases
GTGGCAGGGCGTATCCCGGCCGTGACCGTGAAGACGGATGGTCGCAAGCGACGCTGGCACCAGCACAAGGTGGAGCGCCG
CAATGAGCTGGTGGACGGCACGATTGAGGCGATTCGCCGGCATGGCCGCTTCCTCAGCATGGACGAGATAGCGGCCGAGA
TCGGGGTCTCCAAGACCGTGCTCTACCGCTACTTCGTCGACAAAAACGACCTGACGACCGCCGTGATGATGCGGTTCACG
CAGACCACCTTGATCCCCAACATGATCGCTGCGCTGTCGGCCGATATGGATGGTTTCGAACTGACCCGCGAAATCATCCG
GGTCTATGTCGAGACCGTGGCGGCCCAACCGGAGCCGTATCGGTTCGTGATGGCGAATAGCTCGGCCAGCAAAAGCAAAG
TGATTGCCGACTCGGAGCGAATCATTGCCCGCATGCTCGCGGTGATGCTGCGCCGCCGCATGCAAGAAGCCGGGATGGAC
ACCGGCGGAGTCGAGCCGTGGGCATATCTGATCGTGGGCGGCGTGCAGCTGGCCACCCACTCCTGGATGTCAGACCCGCG
CATGAGCAGTGACGAACTGATCGACTACCTGACGATGCTGAGCTGGAGCGCACTGTGCGGCATCGTCGAGGCCGGCGGAT
CGTTGGAGAAGTTTCGCGAGCAGCCGCATCCTTCGCCGATCGTGCCTGCCTGGGGGCAGGTCTAG

Upstream 100 bases:

>100_bases
CGACACTGTCCTGCGCACCCCGCGCGCGCGTCCAATGTGCCAGCAGGACCCCCAATTGGCCGTAGTATCGGGAGCGTCTA
GTGAATGGGAATTGGCAACA

Downstream 100 bases:

>100_bases
GCTTTAGGGATGCCCGACGCGGGCGCGGGCTCCCGGCTCAGATCGTGGGCCTACGCACTTCGCACCACCAACCCGCCAGC
TGACGGGCCGACCGACACGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAGRIPAVTVKTDGRKRRWHQHKVERRNELVDGTIEAIRRHGRFLSMDEIAAEIGVSKTVLYRYFVDKNDLTTAVMMRFT
QTTLIPNMIAALSADMDGFELTREIIRVYVETVAAQPEPYRFVMANSSASKSKVIADSERIIARMLAVMLRRRMQEAGMD
TGGVEPWAYLIVGGVQLATHSWMSDPRMSSDELIDYLTMLSWSALCGIVEAGGSLEKFREQPHPSPIVPAWGQV

Sequences:

>Translated_234_residues
MAGRIPAVTVKTDGRKRRWHQHKVERRNELVDGTIEAIRRHGRFLSMDEIAAEIGVSKTVLYRYFVDKNDLTTAVMMRFT
QTTLIPNMIAALSADMDGFELTREIIRVYVETVAAQPEPYRFVMANSSASKSKVIADSERIIARMLAVMLRRRMQEAGMD
TGGVEPWAYLIVGGVQLATHSWMSDPRMSSDELIDYLTMLSWSALCGIVEAGGSLEKFREQPHPSPIVPAWGQV
>Mature_233_residues
AGRIPAVTVKTDGRKRRWHQHKVERRNELVDGTIEAIRRHGRFLSMDEIAAEIGVSKTVLYRYFVDKNDLTTAVMMRFTQ
TTLIPNMIAALSADMDGFELTREIIRVYVETVAAQPEPYRFVMANSSASKSKVIADSERIIARMLAVMLRRRMQEAGMDT
GGVEPWAYLIVGGVQLATHSWMSDPRMSSDELIDYLTMLSWSALCGIVEAGGSLEKFREQPHPSPIVPAWGQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 26346; Mature: 26215

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRIPAVTVKTDGRKRRWHQHKVERRNELVDGTIEAIRRHGRFLSMDEIAAEIGVSKTV
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
LYRYFVDKNDLTTAVMMRFTQTTLIPNMIAALSADMDGFELTREIIRVYVETVAAQPEPY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
RFVMANSSASKSKVIADSERIIARMLAVMLRRRMQEAGMDTGGVEPWAYLIVGGVQLATH
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SWMSDPRMSSDELIDYLTMLSWSALCGIVEAGGSLEKFREQPHPSPIVPAWGQV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGRIPAVTVKTDGRKRRWHQHKVERRNELVDGTIEAIRRHGRFLSMDEIAAEIGVSKTV
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
LYRYFVDKNDLTTAVMMRFTQTTLIPNMIAALSADMDGFELTREIIRVYVETVAAQPEPY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCE
RFVMANSSASKSKVIADSERIIARMLAVMLRRRMQEAGMDTGGVEPWAYLIVGGVQLATH
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SWMSDPRMSSDELIDYLTMLSWSALCGIVEAGGSLEKFREQPHPSPIVPAWGQV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]