| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is pucA [H]
Identifier: 148821572
GI number: 148821572
Start: 456398
End: 457540
Strand: Reverse
Name: pucA [H]
Synonym: TBFG_10381
Alternate gene names: 148821572
Gene position: 457540-456398 (Counterclockwise)
Preceding gene: 148821576
Following gene: 148821571
Centisome position: 10.34
GC content: 69.73
Gene sequence:
>1143_bases ATGGCGATCTGGGCCGCCGGTGACACCGCGGGGGTCGCGACGGTGGTGCGAACCTTGCGGTCAGCGCCGCGGCCCCCGGG GGCCGCGATGGTGGTAGCCCCGGACGGTTCGGTAAGTGGGTCGGTGTCGGGCGGCTGCGTGGAGGGTGCGGTATATGAGC TGGCCGCCGAGGTGGCCCAAACCGGGATACCGCGGCTGGAACACTACGGAGTCAGCGACGATACCGCATTCGCGGTAGGC CTGACCTGTGGCGGCATCATCGACGTCTTCGTCGAGCCCGTATCGCGGGCCACGTTTCCCGAGCTGGGCGAGCTGGCCGA CGACATCGGCGCGCAACGCCCGGTCGCCATCGCGACCGTCATCGCCCATCCGGACGAGCGGCGGGTGGGTCGCCGACTGG TGATCCGGCCCGACACAAAGAGCCCCGTGACGGGTTCGCTGGGTTCGGCGCGTGCCGATGCGGCGGTTATCGACGATGCG CGGGGTCTGCTCGCGGTGGGCCGCAGCGAGATCCTCGAATATGGGCCCGATGGGCAGCGGCGTGGCGAGGGCATGGAGGT CTTCGTGTCCAGCCACGCGCCGCGCCCGCGGACGCTGGTGTTCGGTGCCATCGACTTCGCCGCCGCGCTGGCGCGGCAGG GTTCGTTCCTCGGCTACCGGGTCACCGTCTGCGACGCCCGCGCGGTATTCGCCACGCCAGCGCGCTTTCCGACGGCCGAT GACGTCGTCGTCGCATGGCCCCACCGCTATCTGGCTGCCCAGGCGGAGGCGGGTGGTATCGACGAGCGCACGGTGATCTG CGTGCTCACCCACGATCCGAAGTTCGACGTCCCGGTGCTCGAGGTGGCGCTGCGCCTGGGTGTCGGATACGTGGGGGCGA TGGGATCACGCAAGACGCACGACGACCGGATGGATCGGCTACGCGCGGCGGGCCTGACCGACGCCGAGCTGAGCCGGTTG TCCAGCCCGATCGGGCTGGATCTCGGTGCCCGAACCCCCGAGGAGACCGCGGTCTCGATCGCGGCCGACATCATCGCCCG ACGTTGGGGCGGAGGGGGACGCCCGCTGGCCGATATTGCCGGACGGATCCACCATGATGCGCAGGTAGCGGGCGAGTTCA AGGATTACTTAACTCGACATTGA
Upstream 100 bases:
>100_bases CCGAGCCCAGGCGAACCACCGCCGAATAGGCCCGAAGTTGAGCCGGGGTCATGCACTGAAGCCTACTTTGGGAAGCGTGC GTGAAGTGCTTGCCGAGCTG
Downstream 100 bases:
>100_bases CGCCCTTTTCGCGGGCGGCCGACACTGGGGCGCATGCAAGTACCTGGGCCTTTCGAATACGAACGTGCCACCAGCGTGGA CCACGCCATCGGATTGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: XDHase subunit A [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MAIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSVSGSVSGGCVEGAVYELAAEVAQTGIPRLEHYGVSDDTAFAVG LTCGGIIDVFVEPVSRATFPELGELADDIGAQRPVAIATVIAHPDERRVGRRLVIRPDTKSPVTGSLGSARADAAVIDDA RGLLAVGRSEILEYGPDGQRRGEGMEVFVSSHAPRPRTLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFPTAD DVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLGVGYVGAMGSRKTHDDRMDRLRAAGLTDAELSRL SSPIGLDLGARTPEETAVSIAADIIARRWGGGGRPLADIAGRIHHDAQVAGEFKDYLTRH
Sequences:
>Translated_380_residues MAIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSVSGSVSGGCVEGAVYELAAEVAQTGIPRLEHYGVSDDTAFAVG LTCGGIIDVFVEPVSRATFPELGELADDIGAQRPVAIATVIAHPDERRVGRRLVIRPDTKSPVTGSLGSARADAAVIDDA RGLLAVGRSEILEYGPDGQRRGEGMEVFVSSHAPRPRTLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFPTAD DVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLGVGYVGAMGSRKTHDDRMDRLRAAGLTDAELSRL SSPIGLDLGARTPEETAVSIAADIIARRWGGGGRPLADIAGRIHHDAQVAGEFKDYLTRH >Mature_379_residues AIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSVSGSVSGGCVEGAVYELAAEVAQTGIPRLEHYGVSDDTAFAVGL TCGGIIDVFVEPVSRATFPELGELADDIGAQRPVAIATVIAHPDERRVGRRLVIRPDTKSPVTGSLGSARADAAVIDDAR GLLAVGRSEILEYGPDGQRRGEGMEVFVSSHAPRPRTLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFPTADD VVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLGVGYVGAMGSRKTHDDRMDRLRAAGLTDAELSRLS SPIGLDLGARTPEETAVSIAADIIARRWGGGGRPLADIAGRIHHDAQVAGEFKDYLTRH
Specific function: Oxidizes hypoxanthine and xanthine to uric acid. PucA subunit could exert a molybdenum cofactor recruiting function [H]
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789240, Length=243, Percent_Identity=25.9259259259259, Blast_Score=81, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003777 [H]
Pfam domain/function: PF02625 XdhC_CoxI [H]
EC number: =1.17.1.4 [H]
Molecular weight: Translated: 39869; Mature: 39737
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSVSGSVSGGCVEGAVYELAAEVAQ CEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH TGIPRLEHYGVSDDTAFAVGLTCGGIIDVFVEPVSRATFPELGELADDIGAQRPVAIATV CCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE IAHPDERRVGRRLVIRPDTKSPVTGSLGSARADAAVIDDARGLLAVGRSEILEYGPDGQR EECCCHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCHHHHHHCCCCCCC RGEGMEVFVSSHAPRPRTLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFPTAD CCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCC DVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLGVGYVGAMGSRKTH CEEEECCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCC DDRMDRLRAAGLTDAELSRLSSPIGLDLGARTPEETAVSIAADIIARRWGGGGRPLADIA HHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH GRIHHDAQVAGEFKDYLTRH HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSVSGSVSGGCVEGAVYELAAEVAQ EEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH TGIPRLEHYGVSDDTAFAVGLTCGGIIDVFVEPVSRATFPELGELADDIGAQRPVAIATV CCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEE IAHPDERRVGRRLVIRPDTKSPVTGSLGSARADAAVIDDARGLLAVGRSEILEYGPDGQR EECCCHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHCHHHHHHCCCCCCC RGEGMEVFVSSHAPRPRTLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFPTAD CCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCC DVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLGVGYVGAMGSRKTH CEEEECCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCC DDRMDRLRAAGLTDAELSRLSSPIGLDLGARTPEETAVSIAADIIARRWGGGGRPLADIA HHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH GRIHHDAQVAGEFKDYLTRH HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]