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The map label for this gene is dppB [H]

Identifier: 148663527

GI number: 148663527

Start: 4112977

End: 4113903

Strand: Reverse

Name: dppB [H]

Synonym: MRA_3699

Alternate gene names: 148663527

Gene position: 4113903-4112977 (Counterclockwise)

Preceding gene: 148663528

Following gene: 148663526

Centisome position: 93.08

GC content: 63.75

Gene sequence:

>927_bases
ATGGGCTGGTATGTTGCGCGCCGAGTCGCCGTGATGGTGCCGGTTTTCCTGGGCGCGACACTGCTGATCTACGGCATGGT
CTTTCTGCTGCCCGGTGACCCAGTTGCCGCGCTGGCGGGCGACCGTCCGTTGACTCCCGCGGTGGCCGCGCAGCTGCGTT
CGCATTACCACCTCGACGATCCGTTCCTCGTGCAATACTTGCGCTATCTGGGCGGAATTCTGCACGGTGACTTGGGTCGT
GCGTATTCTGGGCTGCCGGTCAGTGCCGTTCTGGCGCATGCGTTTCCGGTCACCATCAGGCTGGCCTTGATCGCCCTGGC
GGTGGAGGCAGTGCTCGGAATCGGATTCGGCGTGATCGCCGGCCTACGTCAGGGTGGAATCTTCGATTCCGCGGTGCTGG
TTACCGGACTTGTCATTATTGCGATCCCCATCTTCGTGCTGGGCTTTCTGGCGCAGTTCTTATTCGGGGTCCAGCTCGAA
ATCGCGCCGGTCACGGTGGGCGAACGGGCGAGCGTCGGCCGCCTGCTGCTACCCGGGATCGTGCTGGGCGCCATGTCATT
CGCCTACGTGGTGCGATTGACCCGCTCGGCGGTGGCGGCCAACGCACACGCTGACTATGTCCGCACCGCCACCGCCAAGG
GGTTGTCGCGGCCCCGGGTGGTGACGGTGCACATTCTGCGCAATTCGCTGATTCCGGTGGTGACCTTCCTGGGCGCGGAT
CTGGGCGCGCTGATGGGCGGAGCGATTGTGACCGAAGGAATCTTCAACATCCACGGCGTCGGGGGCGTGCTGTATCAAGC
GGTCACGCGTCAGGAGACGCCGACGGTGGTGTCGATCGTGACGGTGCTGGTGCTGATCTACCTGATCACCAATCTGTTGG
TGGATCTGCTGTATGCGGCCCTGGACCCGCGGATCCGCTATGGCTGA

Upstream 100 bases:

>100_bases
TGGGATTACATCAGTGTCGTCGGATGGTCGTCGCAAGTCAGCAACGTCACCGTCACCTGGAATGGTCTGCCCGACTACGA
GAACATCGTCAAGGCCTGAC

Downstream 100 bases:

>100_bases
GCACACGGGGTTCTGGCTCGATGCCTGGCGCGGGTTGCGCCGGCGTCCTAAATTCGTGATCGCCGCGGCGCTGATCCTGC
TGATTCTTGTCGTGGCGGCG

Product: peptide ABC transporter permease protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFLVQYLRYLGGILHGDLGR
AYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLE
IAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDPRIRYG

Sequences:

>Translated_308_residues
MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFLVQYLRYLGGILHGDLGR
AYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLE
IAPVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDPRIRYG
>Mature_307_residues
GWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFLVQYLRYLGGILHGDLGRA
YSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEI
APVTVGERASVGRLLLPGIVLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADL
GALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDPRIRYG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=334, Percent_Identity=37.4251497005988, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1787053, Length=309, Percent_Identity=34.9514563106796, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1787497, Length=306, Percent_Identity=30.718954248366, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1789888, Length=306, Percent_Identity=32.6797385620915, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1787761, Length=335, Percent_Identity=33.4328358208955, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=25.7462686567164, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788504, Length=287, Percent_Identity=25.7839721254355, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32537; Mature: 32406

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCC
PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHH
VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIRYG
HCCCCCCC
>Mature Secondary Structure 
GWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCC
PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHH
VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIRYG
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]