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The map label for this gene is dppC [H]

Identifier: 148663526

GI number: 148663526

Start: 4112121

End: 4112921

Strand: Reverse

Name: dppC [H]

Synonym: MRA_3698

Alternate gene names: 148663526

Gene position: 4112921-4112121 (Counterclockwise)

Preceding gene: 148663527

Following gene: 148663525

Centisome position: 93.05

GC content: 64.04

Gene sequence:

>801_bases
GTGATCGCCGCGGCGCTGATCCTGCTGATTCTTGTCGTGGCGGCGTTTCCGTCGTTGTTTACCGCAGCCGATCCCACCTA
TGCCGATCCCAGCCAAAGCATGCTTGCGCCATCGGCCGCGCACTGGTTCGGCACCGACCTGCAGGGCCACGACATCTATT
CGCGCACGGTGTATGGTGCGCGGGCTTCGGTCACGGTCGGGTTGGGGGCAACGCTGGCCGTGTTCGTCGTGGGCGGGGCG
TTAGGCGCATTGGCCGGTTTTTACGGGAGCTGGATCGATGCGGTGGTTTCGCGGGTCACCGATGTGTTTCTCGGCTTGCC
GTTGCTGTTGGCCGCCATCGTGCTCATGCAAGTCATGCATCACCGCACGGTGTGGACGGTGATCGCCATCTTGGCATTGT
TCGGCTGGCCGCAAGTGGCCAGGATCGCGCGCGGTGCGGTGCTCGAGGTGCGTGCCAGCGATTACGTCCTTGCAGCTAAG
GCATTGGGGTTGAATAGGTTTCAGATTCTGCTTCGGCACGCGCTGCCCAACGCCGTGGGCCCGGTGATCGCGGTGGCTAC
CGTCGCTCTGGGGATCTTCATCGTCACCGAGGCCACGCTGTCCTACCTCGGGGTCGGATTGCCGACGTCGGTGGTGTCCT
GGGGTGGCGACATCAATGTCGCGCAGACCCGGCTACGGTCGGGCTCGCCAATTTTGTTCTATCCTGCGGGCGCGCTGGCG
ATTACGGTGCTGGCGTTCATGATGATGGGCGACGCTTTGCGCGACGCGCTGGATCCGGCTTCGCGGGCATGGCGGGCATG
A

Upstream 100 bases:

>100_bases
GATCTGCTGTATGCGGCCCTGGACCCGCGGATCCGCTATGGCTGAGCACACGGGGTTCTGGCTCGATGCCTGGCGCGGGT
TGCGCCGGCGTCCTAAATTC

Downstream 100 bases:

>100_bases
GCGTCCCAGCAGCGCCGCTGTTGTCGGTGGAGGGCCTGGAAGTTACGTTCGGCACCGATGCTCCCGCCGTGTGTGGGGTG
GATCTGGCCGTCCGGAGCGG

Product: peptide ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGA
LGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAK
ALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALA
ITVLAFMMMGDALRDALDPASRAWRA

Sequences:

>Translated_266_residues
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGA
LGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAK
ALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALA
ITVLAFMMMGDALRDALDPASRAWRA
>Mature_266_residues
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGARASVTVGLGATLAVFVVGGA
LGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAK
ALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALA
ITVLAFMMMGDALRDALDPASRAWRA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=263, Percent_Identity=35.7414448669202, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=32.8185328185328, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1788505, Length=246, Percent_Identity=35.7723577235772, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=33.0508474576271, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787498, Length=264, Percent_Identity=32.9545454545455, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789964, Length=225, Percent_Identity=34.6666666666667, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787549, Length=219, Percent_Identity=28.7671232876712, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27879; Mature: 27879

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCHHHHHHHCC
RASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMH
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNAVG
HHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHCCHHHH
PVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEECHHHHH
ITVLAFMMMGDALRDALDPASRAWRA
HHHHHHHHHHHHHHHHHCHHHHHCCC
>Mature Secondary Structure
MIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCHHHHHHHCC
RASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMH
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNAVG
HHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHCCHHHH
PVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCCCEEEECHHHHH
ITVLAFMMMGDALRDALDPASRAWRA
HHHHHHHHHHHHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]