| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is lsr2
Identifier: 148663462
GI number: 148663462
Start: 4049646
End: 4049984
Strand: Reverse
Name: lsr2
Synonym: MRA_3637
Alternate gene names: 148663462
Gene position: 4049984-4049646 (Counterclockwise)
Preceding gene: 148663463
Following gene: 148663461
Centisome position: 91.63
GC content: 65.78
Gene sequence:
>339_bases ATGGCGAAGAAAGTAACCGTCACCTTGGTCGACGATTTCGACGGTTCGGGCGCCGCCGACGAAACGGTCGAATTCGGGCT TGACGGGGTGACCTATGAGATCGACCTTTCCACTAAGAATGCCACGAAACTGCGTGGCGACCTGAAGCAATGGGTGGCGG CGGGCCGTCGCGTCGGTGGGCGCCGGCGCGGCCGTTCCGGATCCGGCCGTGGACGTGGCGCGATCGACCGCGAGCAGAGC GCGGCGATCCGCGAATGGGCTCGTCGTAACGGGCACAATGTGTCGACGCGAGGCCGGATCCCGGCCGACGTCATCGACGC ATACCACGCGGCGACCTGA
Upstream 100 bases:
>100_bases GTGGGTGTTGTGTCTGGATTGAGTATTCTGCGTTCTTATGGCAGATTGGTGACCGGGGAGTCTATCCGTACTGCACAGGA AGAAACGCGAGGGTAAGCCA
Downstream 100 bases:
>100_bases CATTTGGCTACCGGCGCCCAGGCGAAAGCCTGGGCGCCGGTACTTTGCCGCGTTCGCTGGCGGCGAACCGATGGCCGCTC GGCGCCGGAAACGCTTGGGT
Product: putative iron-regulated Lsr2 protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAIDREQS AAIREWARRNGHNVSTRGRIPADVIDAYHAAT
Sequences:
>Translated_112_residues MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAIDREQS AAIREWARRNGHNVSTRGRIPADVIDAYHAAT >Mature_111_residues AKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAIDREQSA AIREWARRNGHNVSTRGRIPADVIDAYHAAT
Specific function: Dominant T-cell antigen and stimulates lymphoproliferation
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LSR2_MYCBO (P65649)
Other databases:
- EMBL: BX248346 - RefSeq: NP_857267.1 - EnsemblBacteria: EBMYCT00000017545 - GeneID: 1093304 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb3628c - GeneTree: EBGT00050000017248 - HOGENOM: HBG669008 - OMA: RNDLKQW - ProtClustDB: CLSK792588 - BioCyc: MBOV233413:MB3628C-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12099; Mature: 11967
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGG CCCEEEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC RRRGRSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure AKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGG CCEEEEEEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC RRRGRSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972