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The map label for this gene is sigJ

Identifier: 148663192

GI number: 148663192

Start: 3724235

End: 3725173

Strand: Reverse

Name: sigJ

Synonym: MRA_3370

Alternate gene names: NA

Gene position: 3725173-3724235 (Counterclockwise)

Preceding gene: 148663197

Following gene: 148663188

Centisome position: 84.28

GC content: 69.44

Gene sequence:

>939_bases
ATGGAGGTTTCCGAATTCGAGGCACTGCGACAGCATCTCATGTCGGTCGCCTACAGGCTGACCGGCACGGTCGCCGATGC
TGAGGACATCGTGCAGGAGGCCTGGCTGCGCTGGGACTCACCGGACACCGTGATCGCCGACCCGCGGGCCTGGCTGACCA
CCGTGGTGAGCCGGCTGGGTCTGGACAAGTTGAGGTCGGCGGCGCACCGGCGGGAGACCTACACCGGCACCTGGCTGCCC
GAACCGGTGGTCACCGGCTTGGACGCGACCGATCCGTTGGCCGCCGTGGTGGCCGCCGAGGACGCCAGGTTCGCGGCCAT
GGTGGTGCTGGAGCGGCTGCGCCCCGATCAGCGGGTCGCGTTCGTGCTGCACGACGGGTTCGCCGTGCCGTTTGCCGAAG
TGGCCGAGGTGCTGGGAACCAGCGAGGCCGCCGCGCGCCAGCTGGCGTCGCGGGCCCGCAAGGCCGTCACGGCGCAGCCC
GCCCTGATATCGGGGGATCCGGATCCGGCCCACAACGAGGTGGTCGGCCGGCTGATGGCCGCCATGGCCGCTGGTGACCT
GGACACGGTGGTGTCGCTGCTGCATCCCGACGTGACGTTTACCGGCGATTCGAATGGCAAGGCGCCCACAGCGGTACGGG
CCGTCCGCGGATCCGACAAGGTGGTCCGGTTCATACTCGGGCTGGTCCAGCGTTACGGCCCGGGGCTCTTCGGCGCGAAT
CAGCTGGCGCTGGTCAACGGAGAGCTCGGCGCCTACACGGCGGGCTTACCCGGGGTCGACGGGTATCGGGCGATGGCGCC
GCGGATCACCGCGATAACCGTGCGCGACGGAAAGGTGTGCGCGCTGTGGGATATCGCCAATCCCGACAAGTTCACCGGCT
CTCCGCTGAAGGAACGTCGGGCGCAGCCCACGGGACGCGGCAGGCATCACCGGAATTGA

Upstream 100 bases:

>100_bases
ACCGGGTGTTGGATGCCGGCACCGTGCCGGGCGAAGTGCAACCAAAGGTTTCGTGTCGTCGTGTTGGCGAGCGCAGCGCT
AGGCTCGGGCAATGACCTCG

Downstream 100 bases:

>100_bases
AGCCTTGCTCGGTGATGCCCAGCGCCGAATTCATCCGGGCTCGCATGTTCTCCACGCCGATCTGGTAAGTCAGCTCGATC
ACGCCGGCCTCGCCGAAGCG

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; Sigma-; ECF-Sigma Factor; ECF Family RNA Polymerase Sigma Factor; Sigma Factor Sigma; RNA Polymerase; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; AlteRNAtive RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; RNA Polymerase ECF-Type Sigma Factor SigJ

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRWDSPDTVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGTWLP
EPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQP
ALISGDPDPAHNEVVGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGLVQRYGPGLFGAN
QLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN

Sequences:

>Translated_312_residues
MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRWDSPDTVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGTWLP
EPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQP
ALISGDPDPAHNEVVGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGLVQRYGPGLFGAN
QLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN
>Mature_312_residues
MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRWDSPDTVIADPRAWLTTVVSRLGLDKLRSAAHRRETYTGTWLP
EPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVAFVLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQP
ALISGDPDPAHNEVVGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGLVQRYGPGLFGAN
QLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33530; Mature: 33530

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRWDSPDTVIADPRAWLTTVVSRLG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHC
LDKLRSAAHRRETYTGTWLPEPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVA
HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEE
FVLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQPALISGDPDPAHNEVVGRLMA
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
AMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGLVQRYGPGLFGAN
HHHCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
QLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGKVCALWDIANPDKFTGSPLKERR
CEEEEECCCCCEECCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHC
AQPTGRGRHHRN
CCCCCCCCCCCC
>Mature Secondary Structure
MEVSEFEALRQHLMSVAYRLTGTVADAEDIVQEAWLRWDSPDTVIADPRAWLTTVVSRLG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHC
LDKLRSAAHRRETYTGTWLPEPVVTGLDATDPLAAVVAAEDARFAAMVVLERLRPDQRVA
HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEE
FVLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQPALISGDPDPAHNEVVGRLMA
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
AMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKVVRFILGLVQRYGPGLFGAN
HHHCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
QLALVNGELGAYTAGLPGVDGYRAMAPRITAITVRDGKVCALWDIANPDKFTGSPLKERR
CEEEEECCCCCEECCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHC
AQPTGRGRHHRN
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA