| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is rsbW
Identifier: 148663150
GI number: 148663150
Start: 3679734
End: 3680171
Strand: Reverse
Name: rsbW
Synonym: MRA_3328
Alternate gene names: NA
Gene position: 3680171-3679734 (Counterclockwise)
Preceding gene: 148663151
Following gene: 148663149
Centisome position: 83.26
GC content: 66.89
Gene sequence:
>438_bases ATGGCCGACTCGGATTTACCCACCAAGGGGCGCCAACGCGGTGTCCGCGCCGTCGAGCTGAACGTTGCTGCCCGCCTGGA GAACCTGGCGCTGCTGCGCACCCTGGTCGGCGCCATCGGCACCTTCGAGGACCTGGATTTCGACGCCGTGGCCGACCTGA GGTTGGCGGTGGACGAGGTGTGCACCCGGTTGATTCGCTCGGCCTTGCCGGATGCCACCCTGCGCCTGGTGGTCGATCCG CGAAAAGACGAAGTTGTGGTGGAGGCTTCTGCTGCCTGCGACACCCACGACGTGGTGGCACCGGGCAGCTTTAGCTGGCA TGTCCTGACCGCGCTGGCCGACGACGTCCAGACCTTCCACGACGGTCGCCAGCCCGATGTAGCCGGCAGTGTCTTCGGCA TCACGTTGACCGCCCGACGGGCGGCATCCAGCAGGTGA
Upstream 100 bases:
>100_bases CGTTAGATCCCCACTACCAGCAGGTCCGACCATGACCGACCAGCTCGAAGACCAGACCCAAGGCGGGAGTACTGTCGATC GAAGCTTGCCGGGAGGGTGC
Downstream 100 bases:
>100_bases CGGCGCGCGCTGCCGGCGGTTCTGCATCGCGAGCTAACGAATACGCCGACGTTCCGGAGATGTTTCGCGAGCTGGTTGGT TTGCCTGCCGGCTCACCGGA
Product: anti-sigma factor RsbW
Products: NA
Alternate protein names: Anti-Sigma Factor RsbW; RsbW Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDP RKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR
Sequences:
>Translated_145_residues MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDP RKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR >Mature_144_residues ADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPR KDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15551; Mature: 15420
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV CCCCCCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH HHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DGRQPDVAGSVFGITLTARRAASSR CCCCCCCCCCEEEEEEEECHHCCCC >Mature Secondary Structure ADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEV CCCCCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQTFH HHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DGRQPDVAGSVFGITLTARRAASSR CCCCCCCCCCEEEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA