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The map label for this gene is IS1086 [H]

Identifier: 148663046

GI number: 148663046

Start: 3568109

End: 3569143

Strand: Reverse

Name: IS1086 [H]

Synonym: MRA_3224

Alternate gene names: 148663046

Gene position: 3569143-3568109 (Counterclockwise)

Preceding gene: 148663047

Following gene: 148663044

Centisome position: 80.75

GC content: 63.67

Gene sequence:

>1035_bases
GTGCGCCAAATTAGTAGTCGCTATCTGTCCGAGGAGGAGCGGATCAACATCGCCGATCTGCGCCGCTCGGGCCTAAGTAT
CCGCAAGATCGCCGACCAGCTCGGACGGGCACCCTCGACGGTGTCGCGGGAGCTACGCCGCAACAGTCGCCGCGATGGCC
AGTACCGGCCGTTCGAAGCGCATCGCTGGGCGGTTCAACGCCGAGTCCGCCGTCACCGGCGTCGGATCGACAAAAACCCC
GACCTTTGTGAGCTGATCGCCGAGCTGCTGGCCCAGCGGTGGAGCCCGCAACAGATCGCCCGGCATCTGCGACGGAAATA
CCCCGATGACCGGTCGATGTGGTTGTGCCACGAAAGCATCTATCAGGCCGTCTATCAGCCTCAATCACGATTGATCCGGC
CGCCGCAGGTCAAGTCGCCACACCGTGGCCCTCTGCGCACGGGACGAACTCATCGCCGCGCCCATCTGCGTCCTGGCCGT
CGCCGCCCGCGCTTCGCCCAGCCGATGTTGTCGATTCACCAGCGGCCGTTCGATCCCGCCGACCGCTCCGAGCCTGGCCA
CTGGGAAGGAGATCTCATCGTTGGTAAGAACCAGGGCTCGGCGATTGGCACCCTCGTCGAGCGACAGACACGTCTGATTC
GGCTGCTGCACCTGCCGACCCACGACGCTTACTGCCTGCGCATCGCGATCACCGAGACCATGAGCGACTTGCCGGTGACG
CTGGTCCGGTCCATCACGTGGGATCAGGGCATCGAAATGGCCCGGCACATCGACATCACCGCCGACCTGGGCGCGCCGGT
CTACTTTTGCGACTCCCGCTCACCGTGGCAGCGAGCCAGCAACGAGAACTCCAACGGTCTGCTACGGCAATACTTCCCAA
AGGGCACCAGCCTCAGCACCTACACGCCCGACCATCTGCGGGCTGTCGAATACGAGATCAATAACCGACCCCGCCAAGTC
CTCGGGCACCGCAGTCCCGCTGAACTTTTCACCGCGCTGCTAACCTCACCAGACCATCAATTGTTGCGACGTTGA

Upstream 100 bases:

>100_bases
TGGAGTATCCCGGACTGCAGCAAACAATTGGGCGCGGGGATACAAGACCTATCGGCGTGGCGAAGCCGTCGGATTCGTGC
CCGCGCTCGATCGTTTGGCT

Downstream 100 bases:

>100_bases
CTAGAACCCACCTTGCCGCGCTCTGGTCAGTATTCAGTTGCCGCCGACAGGAAGAGGGTATGTGATGCAGTGACCACCTC
GGCAGACCCCACCAGCGTTC

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRQISSRYLSEEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVRRHRRRIDKNP
DLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESIYQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGR
RRPRFAQPMLSIHQRPFDPADRSEPGHWEGDLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVT
LVRSITWDQGIEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVEYEINNRPRQV
LGHRSPAELFTALLTSPDHQLLRR

Sequences:

>Translated_344_residues
MRQISSRYLSEEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVRRHRRRIDKNP
DLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESIYQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGR
RRPRFAQPMLSIHQRPFDPADRSEPGHWEGDLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVT
LVRSITWDQGIEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVEYEINNRPRQV
LGHRSPAELFTALLTSPDHQLLRR
>Mature_344_residues
MRQISSRYLSEEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVRRHRRRIDKNP
DLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESIYQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGR
RRPRFAQPMLSIHQRPFDPADRSEPGHWEGDLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVT
LVRSITWDQGIEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVEYEINNRPRQV
LGHRSPAELFTALLTSPDHQLLRR

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=334, Percent_Identity=39.2215568862275, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI1787671, Length=334, Percent_Identity=39.2215568862275, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI1786450, Length=334, Percent_Identity=38.9221556886228, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 40305; Mature: 40305

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQISSRYLSEEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEA
CCCHHHHHCCHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
HRWAVQRRVRRHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
YQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
DRSEPGHWEGDLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVT
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCHHH
LVRSITWDQGIEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLST
HHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCCHHHHCCCCCCCCHHHHHCCCCCCCCC
YTPDHLRAVEYEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR
CCHHHHEEEHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MRQISSRYLSEEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEA
CCCHHHHHCCHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
HRWAVQRRVRRHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
YQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
DRSEPGHWEGDLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVT
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCHHH
LVRSITWDQGIEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLST
HHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCCHHHHCCCCCCCCHHHHHCCCCCCCCC
YTPDHLRAVEYEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR
CCHHHHEEEHHHHCCCHHHHHCCCCHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]