| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is ethR [H]
Identifier: 148662911
GI number: 148662911
Start: 3430882
End: 3431532
Strand: Reverse
Name: ethR [H]
Synonym: MRA_3090
Alternate gene names: 148662911
Gene position: 3431532-3430882 (Counterclockwise)
Preceding gene: 148662913
Following gene: 148662910
Centisome position: 77.64
GC content: 64.06
Gene sequence:
>651_bases GTGACCAGTCATGCCGCAGACGAGAAGCAGGCTGCGCCGCCGATGCGACGGCGTGGTGACAGGCATCGCCAGGCGATTCT GCGGGCCGCACGCGAACTGCTGGAGGAGACACCGTTCGCGGAATTGTCGGTGCGCGCTATCAGCCTTCGCGCAGGGGTAG CCCGCTCCGGTTTCTACTTCTACTTCGATTCCAAATACTCGGTGCTCGCCCAGATCTTGGCCGAGGCCACCGAAGAACTC GAAGAAGCCAGCCAGCATTTCTCCGCCCGTCAGCCAGGGGAGTCACCCGAGCAGTTCGTCAACCGGATGATCGGCAGCGT CGCCGCCGTTTACGCGAACAACGACCCGGTGCTGCGGGCCTGTAATGCGGCACGCCAGAGCGACATGGAGATCCGCGATA TTCTCGAGCGGCAGTTCCAAGTGCTGTTGCGTGAAACCATCGGCGTCTTCGAGGCTGAGGTGAAGGCCGGCACTGCGCAT CCGATCAGCGAAGACCTCCCGACGCTCGTCCGCACCCTGGCAGCTACCACCGCGCTGATGCTGACCGGTGACGCTTTGCT CGTCGGCCCCGACAGTGACGCAGCGCGCCGGGTTCGGGTGCTTGAACAGATGTGGCTCAACGCGCTTTGGGGTGGCGGCA AGGCCCCATAG
Upstream 100 bases:
>100_bases GTGGTGGCTGTAACTGAAATCTATCCTTCTGGTCAATTTGACGGCTACCGATGTTCCGTTTTCAGACGCCATGGTGCAAG GTCAAGGGGGTGATCAAAAG
Downstream 100 bases:
>100_bases CTATCGGGGCGCATCGATCGTCCTACCGGAGGGGGTGTCGGTACCGCCGGTATCGTCACGACCATGTTGCAGAGGGGAGC CGGACAGTATTTCGCGGGTA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTSHAADEKQAAPPMRRRGDRHRQAILRAARELLEETPFAELSVRAISLRAGVARSGFYFYFDSKYSVLAQILAEATEEL EEASQHFSARQPGESPEQFVNRMIGSVAAVYANNDPVLRACNAARQSDMEIRDILERQFQVLLRETIGVFEAEVKAGTAH PISEDLPTLVRTLAATTALMLTGDALLVGPDSDAARRVRVLEQMWLNALWGGGKAP
Sequences:
>Translated_216_residues MTSHAADEKQAAPPMRRRGDRHRQAILRAARELLEETPFAELSVRAISLRAGVARSGFYFYFDSKYSVLAQILAEATEEL EEASQHFSARQPGESPEQFVNRMIGSVAAVYANNDPVLRACNAARQSDMEIRDILERQFQVLLRETIGVFEAEVKAGTAH PISEDLPTLVRTLAATTALMLTGDALLVGPDSDAARRVRVLEQMWLNALWGGGKAP >Mature_215_residues TSHAADEKQAAPPMRRRGDRHRQAILRAARELLEETPFAELSVRAISLRAGVARSGFYFYFDSKYSVLAQILAEATEELE EASQHFSARQPGESPEQFVNRMIGSVAAVYANNDPVLRACNAARQSDMEIRDILERQFQVLLRETIGVFEAEVKAGTAHP ISEDLPTLVRTLAATTALMLTGDALLVGPDSDAARRVRVLEQMWLNALWGGGKAP
Specific function: Involved in the repression of the monooxygenase EthA which is responsible of the formation of the active metabolite of ethionamide (ETH) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR015893 - InterPro: IPR011075 - InterPro: IPR001647 [H]
Pfam domain/function: PF00440 TetR_N [H]
EC number: NA
Molecular weight: Translated: 23835; Mature: 23704
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHAADEKQAAPPMRRRGDRHRQAILRAARELLEETPFAELSVRAISLRAGVARSGFYF CCCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEE YFDSKYSVLAQILAEATEELEEASQHFSARQPGESPEQFVNRMIGSVAAVYANNDPVLRA EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH CNAARQSDMEIRDILERQFQVLLRETIGVFEAEVKAGTAHPISEDLPTLVRTLAATTALM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LTGDALLVGPDSDAARRVRVLEQMWLNALWGGGKAP EECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSHAADEKQAAPPMRRRGDRHRQAILRAARELLEETPFAELSVRAISLRAGVARSGFYF CCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEE YFDSKYSVLAQILAEATEELEEASQHFSARQPGESPEQFVNRMIGSVAAVYANNDPVLRA EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH CNAARQSDMEIRDILERQFQVLLRETIGVFEAEVKAGTAHPISEDLPTLVRTLAATTALM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LTGDALLVGPDSDAARRVRVLEQMWLNALWGGGKAP EECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]