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The map label for this gene is rpmB [H]

Identifier: 148662825

GI number: 148662825

Start: 3343846

End: 3344040

Strand: Direct

Name: rpmB [H]

Synonym: MRA_3004

Alternate gene names: 148662825

Gene position: 3343846-3344040 (Clockwise)

Preceding gene: 148662820

Following gene: 148662830

Centisome position: 75.65

GC content: 65.13

Gene sequence:

>195_bases
ATGGCCGCTGTGTGCGATATCTGCGGGAAAGGCCCCGGCTTCGGCAAGTCGGTGTCGCACTCCCACCGCCGCACCAGCCG
CCGGTGGGATCCGAACATCCAGACTGTGCACGCCGTGACCCGTCCCGGCGGCAACAAGAAGCGACTCAACGTTTGCACAT
CCTGCATCAAGGCGGGCAAGATCACCCGCGGCTGA

Upstream 100 bases:

>100_bases
GGCGCTACCGCACAACAATGGCTATCCTGTGCTAGCCGCGGGCTACACGTAGGCGTCCCGGCCAGGTCGCCGGACCTAAG
AGATTTGAGGAGCTTGACGA

Downstream 100 bases:

>100_bases
CGCCCGGTAACACCTGCACGACTCAGGGCAACCGCCAATCGATCGGCTCGGCACCCATCCCGACGAGCAGTTCGTTGGCG
CGGCTGAACGGACGCGAGCC

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNIQTVHAVTRPGGNKKRLNVCTSCIKAGKITRG

Sequences:

>Translated_64_residues
MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNIQTVHAVTRPGGNKKRLNVCTSCIKAGKITRG
>Mature_63_residues
AAVCDICGKGPGFGKSVSHSHRRTSRRWDPNIQTVHAVTRPGGNKKRLNVCTSCIKAGKITRG

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001383 [H]

Pfam domain/function: PF00830 Ribosomal_L28 [H]

EC number: NA

Molecular weight: Translated: 6904; Mature: 6773

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVCDICGKGPGFGKSVSHSHRRTSRRWDPNIQTVHAVTRPGGNKKRLNVCTSCIKAGK
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC
ITRG
CCCC
>Mature Secondary Structure 
AAVCDICGKGPGFGKSVSHSHRRTSRRWDPNIQTVHAVTRPGGNKKRLNVCTSCIKAGK
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC
ITRG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]