| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is dipZ [H]
Identifier: 148662718
GI number: 148662718
Start: 3196839
End: 3198926
Strand: Direct
Name: dipZ [H]
Synonym: MRA_2899
Alternate gene names: 148662718
Gene position: 3196839-3198926 (Clockwise)
Preceding gene: 148662717
Following gene: 148662719
Centisome position: 72.33
GC content: 62.36
Gene sequence:
>2088_bases ATGGTTGAGTCGAGACGAGCTGCTGCGGCGGCTTCGGCATACGCAAGCAGATGCGGGATTGCACCCGCGACCTCGCAACG CTCACTGGCGACACCACCGACGATCTCGGTCCCGTCCGGTGAGGGCCGCTGCCGTTGCCACGTCGCAAGGGGTGCCGGTC GTGACCCACGACGGCGACTTCGACGCCGTCGATGGTGTGGCCGATGTGGCTATCATTCGCATCTGACGGGTGGCGAGTTC GACGTGAACCGACTCTGTCAACAGCGCTCGCGTGAGCGGTCCTGCCAACTCGTTGCCGTCCCGGCAGATCCAAGACCTAA ACGGCAACGAATAACCGATGTGTTGACCCTCGCACTAGTCGGCTTCCTCGGCGGCCTCATCACCGGAATATCACCATGCA TTCTGCCGGTCCTGCCAGTAATCTTCTTCTCCGGCGCGCAGAGCGTCGATGCAGCGCAGGTGGCGAAACCCGAAGGCGCC GTAGCAGTCCGGCGCAAACGTGCGCTATCAGCGACATTGCGGCCCTACCGGGTGATCGGTGGTCTGGTGCTCAGTTTCGG CATGGTCACCCTGCTCGGCTCGGCATTGCTGTCAGTGCTGCATCTACCGCAGGACGCCATCCGCTGGGCCGCACTGGTCG CCTTGGTGGCAATCGGCGCCGGCCTCATTTTCCCGCGGTTTGAACAACTTCTGGAAAAACCGTTCTCCCGTATTCCGCAG AAGCAAATCGTCACTCGCAGCAACGGTTTCGGGCTGGGTCTAGCCCTGGGCGTGTTGTATGTCCCCTGCGCCGGCCCGAT TCTAGCTGCGATCGTCGTGGCCGGGGCTACTGCCACCATCGGGTTGGGAACCGTCGTGCTCACCGCGACATTCGCACTCG GAGCCGCGTTGCCGTTGTTGTTCTTCGCCCTCGCCGGCCAACGGATAGCTGAGCGGGTGGGCGCTTTTCGGCGCCGCCAG CGTGAGATCAGGATCGCCACCGGTTCCGTGACGATCCTGCTGGCGGTGGCGTTGGTGTTCGATCTGCCGGCCGCGCTGCA GCGGGCTATTCCTGACTACACCGCATCGCTGCAGCAGCAGATCAGCACCGGCACGGAGATACGGGAACAACTGAACCTTG GCGGCATCGTCAACGCCCAGAACGCACAGCTGTCGAATTGCAGCGACGGGGCCGCACAACTCGAAAGCTGCGGCACTGCA CCAGATCTCAAAGGCATCACCGGCTGGCTCAACACGCCCGGCAACAAGCCGATCGACCTGAAATCATTGCGTGGCAAGGT GGTGCTGATTGACTTTTGGGCCTACTCCTGCATTAACTGCCAACGGGCCATCCCCCACGTCGTCGGTTGGTATCAGGCCT ACAAAGACAGTGGTTTGGCGGTCATCGGCGTGCACACCCCCGAGTACGCTTTCGAGAAGGTCCCGGGCAACGTCGCCAAA GGCGCGGCCAATCTGGGCATCAGCTATCCGATTGCGCTCGACAACAACTACGCCACTTGGACCAACTACCGGAATCGCTA TTGGCCCGCCGAGTATCTGATCGACGCTACCGGGACGGTGCGGCACATCAAGTTCGGAGAAGGCGATTACAACGTCACCG AGACGTTGGTCAGGCAGTTGCTCAACGATGCCAAGCCCGGCGTCAAACTCCCCCAGCCCAGCAGCACCACCACGCCCGAC CTTACCCCGCGGGCCGCACTTACTCCCGAGACGTACTTCGGAGTCGGCAAGGTGGTCAACTACGGCGGCGGCGGCGCATA TGACGAAGGGTCGGCCGTGTTTGACTACCCGCCCAGTTTGGCAGCCAACAGCTTTGCACTGCGCGGCCGGTGGGCGCTGG ACTATCAGGGTGCCACGTCCGACGGCAACGACGCCGCTATCAAATTGAATTACCACGCCAAAGACGTCTACATCGTTGTC GGTGGCACCGGCACCCTCACGGTCGTGAGGGACGGAAAGCCAGCCACACTACCGATCAGCGGGCCGCCGACCACCCATCA GGTGGTCGCCGGCTATCGGCTGGCGTCCGAAACACTTGAGGTGCGGCCCAGCAAGGGGCTACAGGTTTTTTCCTTCACCT ACGGATGA
Upstream 100 bases:
>100_bases GCCGGGCTGCTACGGCGCGTGCAGGCCGGCGAAGACATCACCATCACTGCCAACGGCAAACCCGTTGCGCTGCTGACCGC AGGCAGCCCGCACGGCGCCG
Downstream 100 bases:
>100_bases ATATCCATCCAAGACCCGGACGGCTCCGAAGAAATCATGTCGGGGGTAGCGAGACGGCACAAGCCGCCGTCTCCGGCAGC GAAGGAGTGAACGGCATGAA
Product: putative integral membrane c-type cytochrome biogenesis protein DipZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MVESRRAAAAASAYASRCGIAPATSQRSLATPPTISVPSGEGRCRCHVARGAGRDPRRRLRRRRWCGRCGYHSHLTGGEF DVNRLCQQRSRERSCQLVAVPADPRPKRQRITDVLTLALVGFLGGLITGISPCILPVLPVIFFSGAQSVDAAQVAKPEGA VAVRRKRALSATLRPYRVIGGLVLSFGMVTLLGSALLSVLHLPQDAIRWAALVALVAIGAGLIFPRFEQLLEKPFSRIPQ KQIVTRSNGFGLGLALGVLYVPCAGPILAAIVVAGATATIGLGTVVLTATFALGAALPLLFFALAGQRIAERVGAFRRRQ REIRIATGSVTILLAVALVFDLPAALQRAIPDYTASLQQQISTGTEIREQLNLGGIVNAQNAQLSNCSDGAAQLESCGTA PDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAK GAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAKPGVKLPQPSSTTTPD LTPRAALTPETYFGVGKVVNYGGGGAYDEGSAVFDYPPSLAANSFALRGRWALDYQGATSDGNDAAIKLNYHAKDVYIVV GGTGTLTVVRDGKPATLPISGPPTTHQVVAGYRLASETLEVRPSKGLQVFSFTYG
Sequences:
>Translated_695_residues MVESRRAAAAASAYASRCGIAPATSQRSLATPPTISVPSGEGRCRCHVARGAGRDPRRRLRRRRWCGRCGYHSHLTGGEF DVNRLCQQRSRERSCQLVAVPADPRPKRQRITDVLTLALVGFLGGLITGISPCILPVLPVIFFSGAQSVDAAQVAKPEGA VAVRRKRALSATLRPYRVIGGLVLSFGMVTLLGSALLSVLHLPQDAIRWAALVALVAIGAGLIFPRFEQLLEKPFSRIPQ KQIVTRSNGFGLGLALGVLYVPCAGPILAAIVVAGATATIGLGTVVLTATFALGAALPLLFFALAGQRIAERVGAFRRRQ REIRIATGSVTILLAVALVFDLPAALQRAIPDYTASLQQQISTGTEIREQLNLGGIVNAQNAQLSNCSDGAAQLESCGTA PDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAK GAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAKPGVKLPQPSSTTTPD LTPRAALTPETYFGVGKVVNYGGGGAYDEGSAVFDYPPSLAANSFALRGRWALDYQGATSDGNDAAIKLNYHAKDVYIVV GGTGTLTVVRDGKPATLPISGPPTTHQVVAGYRLASETLEVRPSKGLQVFSFTYG >Mature_695_residues MVESRRAAAAASAYASRCGIAPATSQRSLATPPTISVPSGEGRCRCHVARGAGRDPRRRLRRRRWCGRCGYHSHLTGGEF DVNRLCQQRSRERSCQLVAVPADPRPKRQRITDVLTLALVGFLGGLITGISPCILPVLPVIFFSGAQSVDAAQVAKPEGA VAVRRKRALSATLRPYRVIGGLVLSFGMVTLLGSALLSVLHLPQDAIRWAALVALVAIGAGLIFPRFEQLLEKPFSRIPQ KQIVTRSNGFGLGLALGVLYVPCAGPILAAIVVAGATATIGLGTVVLTATFALGAALPLLFFALAGQRIAERVGAFRRRQ REIRIATGSVTILLAVALVFDLPAALQRAIPDYTASLQQQISTGTEIREQLNLGGIVNAQNAQLSNCSDGAAQLESCGTA PDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAK GAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAKPGVKLPQPSSTTTPD LTPRAALTPETYFGVGKVVNYGGGGAYDEGSAVFDYPPSLAANSFALRGRWALDYQGATSDGNDAAIKLNYHAKDVYIVV GGTGTLTVVRDGKPATLPISGPPTTHQVVAGYRLASETLEVRPSKGLQVFSFTYG
Specific function: Unknown
COG id: COG0785
COG function: function code O; Cytochrome c biogenesis protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=166, Percent_Identity=31.9277108433735, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI116007528, Length=121, Percent_Identity=33.0578512396694, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 74169; Mature: 74169
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESRRAAAAASAYASRCGIAPATSQRSLATPPTISVPSGEGRCRCHVARGAGRDPRRRL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCHHHHH RRRRWCGRCGYHSHLTGGEFDVNRLCQQRSRERSCQLVAVPADPRPKRQRITDVLTLALV HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH GFLGGLITGISPCILPVLPVIFFSGAQSVDAAQVAKPEGAVAVRRKRALSATLRPYRVIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHH GLVLSFGMVTLLGSALLSVLHLPQDAIRWAALVALVAIGAGLIFPRFEQLLEKPFSRIPQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH KQIVTRSNGFGLGLALGVLYVPCAGPILAAIVVAGATATIGLGTVVLTATFALGAALPLL HHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH FFALAGQRIAERVGAFRRRQREIRIATGSVTILLAVALVFDLPAALQRAIPDYTASLQQQ HHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHH ISTGTEIREQLNLGGIVNAQNAQLSNCSDGAAQLESCGTAPDLKGITGWLNTPGNKPIDL HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEH KSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAK HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHC GAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL CHHHCCCEEEEEECCCEEEECCCCCCCCCHHHEEECCCCEEEEEECCCCCCHHHHHHHHH LNDAKPGVKLPQPSSTTTPDLTPRAALTPETYFGVGKVVNYGGGGAYDEGSAVFDYPPSL HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHEECCCCCCCCCCCEEEECCCCC AANSFALRGRWALDYQGATSDGNDAAIKLNYHAKDVYIVVGGTGTLTVVRDGKPATLPIS CCCCEEECCEEEEEECCCCCCCCCEEEEEEEECCEEEEEEECCCEEEEEECCCCCEEECC GPPTTHQVVAGYRLASETLEVRPSKGLQVFSFTYG CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC >Mature Secondary Structure MVESRRAAAAASAYASRCGIAPATSQRSLATPPTISVPSGEGRCRCHVARGAGRDPRRRL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCHHHHH RRRRWCGRCGYHSHLTGGEFDVNRLCQQRSRERSCQLVAVPADPRPKRQRITDVLTLALV HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH GFLGGLITGISPCILPVLPVIFFSGAQSVDAAQVAKPEGAVAVRRKRALSATLRPYRVIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHHHHHH GLVLSFGMVTLLGSALLSVLHLPQDAIRWAALVALVAIGAGLIFPRFEQLLEKPFSRIPQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH KQIVTRSNGFGLGLALGVLYVPCAGPILAAIVVAGATATIGLGTVVLTATFALGAALPLL HHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH FFALAGQRIAERVGAFRRRQREIRIATGSVTILLAVALVFDLPAALQRAIPDYTASLQQQ HHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHH ISTGTEIREQLNLGGIVNAQNAQLSNCSDGAAQLESCGTAPDLKGITGWLNTPGNKPIDL HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEH KSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAK HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHC GAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL CHHHCCCEEEEEECCCEEEECCCCCCCCCHHHEEECCCCEEEEEECCCCCCHHHHHHHHH LNDAKPGVKLPQPSSTTTPDLTPRAALTPETYFGVGKVVNYGGGGAYDEGSAVFDYPPSL HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHEECCCCCCCCCCCEEEECCCCC AANSFALRGRWALDYQGATSDGNDAAIKLNYHAKDVYIVVGGTGTLTVVRDGKPATLPIS CCCCEEECCEEEEEECCCCCCCCCEEEEEEEECCEEEEEEECCCEEEEEECCCCCEEECC GPPTTHQVVAGYRLASETLEVRPSKGLQVFSFTYG CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]