| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is 148662492
Identifier: 148662492
GI number: 148662492
Start: 2985763
End: 2987202
Strand: Reverse
Name: 148662492
Synonym: MRA_2680
Alternate gene names: NA
Gene position: 2987202-2985763 (Counterclockwise)
Preceding gene: 148662493
Following gene: 148662481
Centisome position: 67.58
GC content: 67.57
Gene sequence:
>1440_bases ATGACTAATGAACAACATTTCGCTGACGATGGCGACATCAAACAGCTCAGCCTCGACGAAACCCGTTCCGCGGCAAAACA GCTCCTCGACTCCGTCGAGGGCGACCTGACCGGTGATGTGGCGCAACGTTTTCAGGCGCTGACACGCCACGCCGAGGAAC TGCGGGCGGAGCAGCGCCGCCGCGGCCGCGAAGCCGAGGAGGCGCTGCGCCGCTGCCGGGCCGGTGAGCTGAGGGTGGTG CCCGGTGCTCCCACCGGCGGCGACGACGGCGACGCGCCGCCGGGCAACTCGTTGCGCGACATCGCGTTTCGCACACTGGA CGTTTGTGTGCGCGATGGCCTGATGTCGTCGCGGGCGGCGGAAGCCGCGGAAACCTTGTGCCGCACCGGGCCGCCGCAGT CGACGTCGTGGGCGCAGCGCTGGCTGGCGGCCACCGGCAACCGCGACTACCTGGGGGCGTTCGTCAAGAGGGTTTCGAAC CCTGTTGCGGGGCACACGACCTGGACCGACCGGGAAGCGGCCGCGTGGCGTGAGGCGGCCGCGGTGGCCGCCGAGCAGCG AGCAATGGGCTTGGTGGACACCGCCGGCGGGTTTTTGATCCCGGCGGCGCTGGATCCGGCGATTCTGCTGTCGGGTGATG GTTCAACGAATCCGATCCGGCAGGTGGCGAGGGTGGTGCAAACGACCTCCGAGGTTTGGCGGGGCGTGACCTCCGAAGGC GCCGAGGCTCATTGGTACTCCGAAGCCCAGGAGGTGTCCGACGATTCGCCAACGCTGGCCCAGCCGGCGGTGCCGAGCTA CCGTGGCTCCTGCTGGATTCCGTTCAGTCTCGAGATTGAGGGTGACGCCGCCGGATTCGTCGCAGAGGTGGGCCGCGTCC TAGCGGATTCGGTTGAGCAGCTGCAGGCGGCGGCGTTCGTCAGCGGCTCCGGCAACGGCGAGCCCACCGGATTCGTCTCC GCACTGACCGGCACCGCGGACTACACCGTCACCGGCGCGGGGACGGAAGCCGTTGTAGCCGCCGACGTTTACGCGCTGCA GTCGGCGTTGCCGCCGCGCTTTCAATCCAACAGCGCGTTCGCGGCGAACTTGTCCACCATCAACGTGCTGCGCCAGGCGG AAACCGCGAATGGGGCGCTGAAATTCCCATCGCTGCACGCCAGCCCGCCGATGCTGGCCGGGAAACACATCTGGGAGGTG TCGAACATGGACACCGTGGACGCGGCGGTGACCGCCACCAATTACCCGCTGGTGCTTGGCGACTGGAAGCAGTTCATCAT CACCGACCGGGTCGGGTCGACGGTGGAGCTGGTGCCGCACGTGTTCGGCGGCAACCGCCGACCGACCGGACAGCGCGGAT TCTTCTGCTGGTTCCGAGTCGGTTCTGATGTGCTGGTGGACAATGCGTTCCGCGTGCTGAAGGTGCAGACCACCGCGTAG
Upstream 100 bases:
>100_bases CTGGGCGCGCAGATCGCCGGTGTGCGCGCGGAATCGCTTGCAGTCGTTTCCCGTTCGCTAGCCGAAGCCAGGTTAGCCCT GATGGATTGGTAACTCTCTC
Downstream 100 bases:
>100_bases GTGCCAGGCGTGGGCGGCCCTTTTCGGGTCGTGCGGGCAAAAAGGGAGAACTTTAGCAACCTTTCGGCTCCCAGCGGCCC GCACGGCCCGGAGACTTAGG
Product: putative phiRv2 prophage protein
Products: NA
Alternate protein names: Phage Capsid Protein HK; Phage Capsid Protein; Phage Capsid Protein; PhiRv2 Prophage Protein; PhiRv1 Phage Protein; PhiRV1 Phage Protein
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MTNEQHFADDGDIKQLSLDETRSAAKQLLDSVEGDLTGDVAQRFQALTRHAEELRAEQRRRGREAEEALRRCRAGELRVV PGAPTGGDDGDAPPGNSLRDIAFRTLDVCVRDGLMSSRAAEAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSN PVAGHTTWTDREAAAWREAAAVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEVWRGVTSEG AEAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDAAGFVAEVGRVLADSVEQLQAAAFVSGSGNGEPTGFVS ALTGTADYTVTGAGTEAVVAADVYALQSALPPRFQSNSAFAANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEV SNMDTVDAAVTATNYPLVLGDWKQFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA
Sequences:
>Translated_479_residues MTNEQHFADDGDIKQLSLDETRSAAKQLLDSVEGDLTGDVAQRFQALTRHAEELRAEQRRRGREAEEALRRCRAGELRVV PGAPTGGDDGDAPPGNSLRDIAFRTLDVCVRDGLMSSRAAEAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSN PVAGHTTWTDREAAAWREAAAVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEVWRGVTSEG AEAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDAAGFVAEVGRVLADSVEQLQAAAFVSGSGNGEPTGFVS ALTGTADYTVTGAGTEAVVAADVYALQSALPPRFQSNSAFAANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEV SNMDTVDAAVTATNYPLVLGDWKQFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA >Mature_478_residues TNEQHFADDGDIKQLSLDETRSAAKQLLDSVEGDLTGDVAQRFQALTRHAEELRAEQRRRGREAEEALRRCRAGELRVVP GAPTGGDDGDAPPGNSLRDIAFRTLDVCVRDGLMSSRAAEAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSNP VAGHTTWTDREAAAWREAAAVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEVWRGVTSEGA EAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDAAGFVAEVGRVLADSVEQLQAAAFVSGSGNGEPTGFVSA LTGTADYTVTGAGTEAVVAADVYALQSALPPRFQSNSAFAANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEVS NMDTVDAAVTATNYPLVLGDWKQFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA
Specific function: Unknown
COG id: COG4653
COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51100; Mature: 50969
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEQHFADDGDIKQLSLDETRSAAKQLLDSVEGDLTGDVAQRFQALTRHAEELRAEQRR CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RGREAEEALRRCRAGELRVVPGAPTGGDDGDAPPGNSLRDIAFRTLDVCVRDGLMSSRAA CCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSNPVAGHTTWTDREAAAWREAA HHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEVWRGVTSEG HHHHHHHHCCCEECCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC AEAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDAAGFVAEVGRVLADSVEQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH LQAAAFVSGSGNGEPTGFVSALTGTADYTVTGAGTEAVVAADVYALQSALPPRFQSNSAF HHHHHEECCCCCCCCCHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCE AANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEVSNMDTVDAAVTATNYPLVLG EECHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCHHHHEEEECCCCEEEE DWKQFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA CCHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHCCCEEEEEEEECC >Mature Secondary Structure TNEQHFADDGDIKQLSLDETRSAAKQLLDSVEGDLTGDVAQRFQALTRHAEELRAEQRR CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RGREAEEALRRCRAGELRVVPGAPTGGDDGDAPPGNSLRDIAFRTLDVCVRDGLMSSRAA CCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSNPVAGHTTWTDREAAAWREAA HHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEVWRGVTSEG HHHHHHHHCCCEECCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC AEAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDAAGFVAEVGRVLADSVEQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH LQAAAFVSGSGNGEPTGFVSALTGTADYTVTGAGTEAVVAADVYALQSALPPRFQSNSAF HHHHHEECCCCCCCCCHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCE AANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEVSNMDTVDAAVTATNYPLVLG EECHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCHHHHEEEECCCCEEEE DWKQFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA CCHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA