| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is PE_PGRS35
Identifier: 148661793
GI number: 148661793
Start: 2236144
End: 2237820
Strand: Direct
Name: PE_PGRS35
Synonym: MRA_1995
Alternate gene names: 148661793
Gene position: 2236144-2237820 (Clockwise)
Preceding gene: 148661787
Following gene: 148661795
Centisome position: 50.59
GC content: 64.88
Gene sequence:
>1677_bases GTGTCATTTCTGGTCGTGGTTCCCGAGTTCTTGACGTCCGCGGCAGCGGATGTGGAGAACATAGGTTCCACACTGCGCGC GGCGAATGCCGCGGCTGCCGCCTCGACCACCGCGCTTGCGGCCGCTGGCGCTGATGAGGTATCGGCGGCGGTGGCAGCGC TGTTTGCCAGGTTCGGTCAGGAATATCAAGCGGTCAGCGCGCAGGCGAGCGCTTTCCATCAACAGTTCGTGCAGACGCTG AACTCGGCGTCAGGATCGTATGCGGCCGCGGAGGCCACCATCGCGTCACAGTTGCAGACCGCGCAGCACGATCTGCTGGG CGCGGTCAATGCACCAACCGAAACGTTGTTGGGGCGTCCGCTAATCGGCGACGGAGCACCCGGGACGGCAACGAGTCCGA ATGGCGGGGCGGGTGGGCTGCTGTACGGCAACGGCGGCAACGGTTATTCCGCGACGGCGTCGGGGGTCGGCGGCGGGGCC GGCGGTTCCGCGGGGTTGATCGGCAATGGCGGCGCCGGGGGAGCCGGCGGACCCAACGCCCCCGGGGGAGCCGGCGGCAA CGGTGGCTGGCTGCTCGGCAACGGCGGGATCGGCGGGCCCGGGGGCGCGTCGAGCATCCCCGGCATGAGTGGTGGAGCCG GCGGAACCGGCGGTGCCGCAGGACTTTTGGGCTGGGGAGCGAACGGCGGAGCCGGCGGCCTCGGTGATGGAGTCGGTGTC GATCGTGGCACGGGCGGCGCCGGAGGCCGCGGCGGCCTGTTGTATGGCGGATACGGCGTCAGTGGGCCAGGCGGCGACGG CAGAACCGTCCCGCTGGAGATAATTCATGTCACAGAGCCGACGGTACATGCCAACGTCAACGGCGGACCGACGTCAACCA TTCTGGTCGACACCGGATCCGCTGGTCTTGTTGTCTCGCCTGAGGATGTCGGGGGAATCCTGGGAGTGCTTCACATGGGC CTCCCAACCGGATTGAGCATCAGCGGTTACAGCGGGGGGCTGTACTACATCTTCGCCACGTATACCACGACGGTGGACTT CGGGAATGGCATCGTCACCGCGCCGACCGCCGTTAATGTCGTCCTCTTGTCCATCCCAACGTCCCCCTTCGCCATTTCGA CCTACTTCAGCGCCTTGCTGGCCGATCCGACAACAACTCCGTTCGAAGCCTATTTCGGTGCCGTCGGCGTGGACGGCGTT CTGGGAGTTGGGCCCAATGCGGTGGGACCAGGCCCCAGCATTCCGACGATGGCGTTACCGGGTGACCTCAACCAGGGAGT GCTCATCGACGCACCCGCAGGTGAGCTCGTGTTCGGTCCCAACCCGCTACCTGCGCCCAACGTCGAGGTCGTCGGATCGC CGATCACCACCCTGTACGTAAAGATCGATGGTGGGACTCCCATACCCGTCCCCTCGATCATCGATTCCGGTGGGGTAACG GGAACCATCCCGTCATATGTCATCGGATCCGGAACCCTGCCGGCGAACACAAACATTGAGGTCTACACCAGCCCCGGCGG TGATCGGCTCTACGCGTTCAACACAAACGATTACCGCCCGACCGTCATTTCATCCGGCCTGATGAATACCGGGTTCTTGC CCTTCAGATTCCAGCCGGTGTACATCGACTACAGCCCCAGCGGTATAGGGACAACAGTCTTTGATCATCCGGCGTGA
Upstream 100 bases:
>100_bases TGCTGTGCCGTGCGGTAGCTACTGAAAATCCGAGATGTCAAAGGCAGCGTCTGGATACGCTGTATGCGCGCAGGGATGGT GATCGAGGCGGAGGGGCGGC
Downstream 100 bases:
>100_bases TCGAGCCTGTTCGCCGCGAATGTCGCCGCCTGGCTTGTCATCCCCGACTGAACATACGAAACATGCGCCATAATATTGCC GCCTCCGGTGCATATTGGAT
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQEYQAVSAQASAFHQQFVQTL NSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRPLIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGA GGSAGLIGNGGAGGAGGPNAPGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMG LPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGV LGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA
Sequences:
>Translated_558_residues MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQEYQAVSAQASAFHQQFVQTL NSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRPLIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGA GGSAGLIGNGGAGGAGGPNAPGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMG LPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGV LGVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA >Mature_557_residues SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQEYQAVSAQASAFHQQFVQTLN SASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRPLIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAG GSAGLIGNGGAGGAGGPNAPGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGVD RGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGSAGLVVSPEDVGGILGVLHMGL PTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNVVLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVL GVGPNAVGPGPSIPTMALPGDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVTG TIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPVYIDYSPSGIGTTVFDHPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PG35_MYCTU (Q10873)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: E70756 - RefSeq: NP_336497.1 - RefSeq: YP_177854.1 - ProteinModelPortal: Q10873 - EnsemblBacteria: EBMYCT00000000604 - EnsemblBacteria: EBMYCT00000070740 - GeneID: 885921 - GeneID: 924380 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2036 - KEGG: mtu:Rv1983 - TIGR: MT2036 - TubercuList: Rv1983 - GeneTree: EBGT00070000031715 - HOGENOM: HBG569197 - OMA: NSSAGSY - ProtClustDB: CLSK799857 - InterPro: IPR000084
Pfam domain/function: PF00934 PE
EC number: NA
Molecular weight: Translated: 53738; Mature: 53607
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1ed1932c)-; HASH(0x1eef5eb4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCH EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA CCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCC PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCEEEEEECCC AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV CCEEECCHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEEEEEECCCCEEECCCEEEE VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP EEEEECCCCEEHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCEECC GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT CCCCCCEEEECCCCCEEECCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCHHHCCCCCC GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV CCCCCCEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHEECCCCCCCCCCEEEEEE YIDYSPSGIGTTVFDHPA EEEECCCCCCCCCCCCCH >Mature Secondary Structure SFLVVVPEFLTSAAADVENIGSTLRAANAAAAASTTALAAAGADEVSAAVAALFARFGQ CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCH EYQAVSAQASAFHQQFVQTLNSASGSYAAAEATIASQLQTAQHDLLGAVNAPTETLLGRP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC LIGDGAPGTATSPNGGAGGLLYGNGGNGYSATASGVGGGAGGSAGLIGNGGAGGAGGPNA CCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCC PGGAGGNGGWLLGNGGIGGPGGASSIPGMSGGAGGTGGAAGLLGWGANGGAGGLGDGVGV CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC DRGTGGAGGRGGLLYGGYGVSGPGGDGRTVPLEIIHVTEPTVHANVNGGPTSTILVDTGS CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCEEEEEECCC AGLVVSPEDVGGILGVLHMGLPTGLSISGYSGGLYYIFATYTTTVDFGNGIVTAPTAVNV CCEEECCHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEEEEEECCCCEEECCCEEEE VLLSIPTSPFAISTYFSALLADPTTTPFEAYFGAVGVDGVLGVGPNAVGPGPSIPTMALP EEEEECCCCEEHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCCEECC GDLNQGVLIDAPAGELVFGPNPLPAPNVEVVGSPITTLYVKIDGGTPIPVPSIIDSGGVT CCCCCCEEEECCCCCEEECCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCHHHCCCCCC GTIPSYVIGSGTLPANTNIEVYTSPGGDRLYAFNTNDYRPTVISSGLMNTGFLPFRFQPV CCCCCCEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHEECCCCCCCCCCEEEEEE YIDYSPSGIGTTVFDHPA EEEECCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036