| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is yedY [C]
Identifier: 148661559
GI number: 148661559
Start: 1992738
End: 1993877
Strand: Direct
Name: yedY [C]
Synonym: MRA_1768C
Alternate gene names: 148661559
Gene position: 1992738-1993877 (Clockwise)
Preceding gene: 148661551
Following gene: 148661560
Centisome position: 45.08
GC content: 65.0
Gene sequence:
>1140_bases TTGACCGATCGAGGGGAGAACAGGACAACGATTGCCATGCTGGAGACCGCTGGATTATGGGGCAAGCGCGCCGACATGAT TGTGCGTGGATGCTTGCCTTATAACGCTGAGCCACCGCCGGCCGTGTTGGCTGGCAGCGACATCACCCCGATCAATGCGT TCTACGTCCGCAATCACGGCCCGGTCCCCGACATCGCGCCGCAGCATTGGCGGCTGACGGTCGGCGGGCTGGTGGACAAC CCGCTTACCGTGACCTATGAACGGCTGACCACCGAGTTCGACCAACACTGTGTGGTGGCGACGCTGGCGTGCGCCGGCAA TCGGCGTGCGGAGCTGTTACGGGTGCGACAGATCCCAGGTAAGGAACCCTGGGCGCACGGTGCGATCTCGACCGCTCAGT GGTGTGGTGTCCGTCTGGCAGACATCCTGCAGGCCGCCGATGTGCATATCGACGAGGGGCTACACGTGGCCTTCGATGCT CCGGATGTAGCTGAGGAGGCTCGCCCCATCCAGCCCTATGGCAGCTCGATCCCGCTGAGCAAAGCGCTGTCGCCGGAAGT TCTGCTGGCCTGGCAGATGAACTCCGAACCGCTGCCGCGTGCCCACGGTGGTCCGGTTCGCGTGGTGGTACCCGGATTCA TCGGGGCCCGCAGCGTCAAGTGGGTCACCGCCATCACCGTGCAGCCTGGTGCTTCGCAGAATTACTTTCAGGCTCTGGAT TACCGCATCCTTCCGGCGGATGCGGACGCCGACATCGTCGGGCCGGGCGAAGGGATTTCGCTTTCGTCGCTGGCGCTCAA CTGCGACATCCTCGACCCCACCGATGGCGACGACGTACCGGCAGGGGCGCTGACCATTCGTGGCTATGGGATGGCCGGCG ATGGCCGCAGTGTCGAACGAGTTGATGTCTCTGTCGACGACGGGCTCACCTGGCAGCAGGCCGACCTACACGCCGCGCCC AGCCAGTGGTCATGGCGGCCGTGGTCGCTGACGGTCGACGTGGAGCCGGGGCCGTTGGGTATCACCGCACGTGCCTGGGA CGATACCGGGGCGCTGCAGCCCGAATCGGCTGTGTCCCTGTGGAATCCGCGCGGATACGGCAACAACGCTTGGGCCCGCG TCGCATTGCGCGTGAGTTAG
Upstream 100 bases:
>100_bases CTGCCTGCGCTTCGCGCCAGCCGACAGACACAACCAGAACTTGTGAGCGCACAAGGTCAAACCCGCTACTGGAAGTTCGA GCAACGGCGGAGCATGGGAG
Downstream 100 bases:
>100_bases CCGGGTACTCGGTCATCAACCGGTTGCGGGGCCCTCCGAAGACCACTGGAAAGCACTGCCGATCTGATGGTTAGGGTGGT TGAATTAGCCGACTCGGTCG
Product: putative sulfite oxidase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Sulfite Oxidase And ; Sulfite-Dehydrogenase; Sulfite Dehydrogenase SoxC Protein; Molybdopterin Oxidoreductase Family Protein; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfur Oxidation Molybdopterin C Protein; Sulfite Oxidase SoxC; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; LigA Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfite Oxidase And Related S; Mo-Co Oxidoreductase Dimerisation Domain; Sulfite Oxidase Molybdopterin Subunit; Sulfur Dehydrogenase Subunit SoxC; Sulfur Oxidation Protein SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase; Mo-Co Oxidoreductase Dimerisation Subunit; Reductase; Cytochrome C Dehydrogenase-Like Protein
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTDRGENRTTIAMLETAGLWGKRADMIVRGCLPYNAEPPPAVLAGSDITPINAFYVRNHGPVPDIAPQHWRLTVGGLVDN PLTVTYERLTTEFDQHCVVATLACAGNRRAELLRVRQIPGKEPWAHGAISTAQWCGVRLADILQAADVHIDEGLHVAFDA PDVAEEARPIQPYGSSIPLSKALSPEVLLAWQMNSEPLPRAHGGPVRVVVPGFIGARSVKWVTAITVQPGASQNYFQALD YRILPADADADIVGPGEGISLSSLALNCDILDPTDGDDVPAGALTIRGYGMAGDGRSVERVDVSVDDGLTWQQADLHAAP SQWSWRPWSLTVDVEPGPLGITARAWDDTGALQPESAVSLWNPRGYGNNAWARVALRVS
Sequences:
>Translated_379_residues MTDRGENRTTIAMLETAGLWGKRADMIVRGCLPYNAEPPPAVLAGSDITPINAFYVRNHGPVPDIAPQHWRLTVGGLVDN PLTVTYERLTTEFDQHCVVATLACAGNRRAELLRVRQIPGKEPWAHGAISTAQWCGVRLADILQAADVHIDEGLHVAFDA PDVAEEARPIQPYGSSIPLSKALSPEVLLAWQMNSEPLPRAHGGPVRVVVPGFIGARSVKWVTAITVQPGASQNYFQALD YRILPADADADIVGPGEGISLSSLALNCDILDPTDGDDVPAGALTIRGYGMAGDGRSVERVDVSVDDGLTWQQADLHAAP SQWSWRPWSLTVDVEPGPLGITARAWDDTGALQPESAVSLWNPRGYGNNAWARVALRVS >Mature_378_residues TDRGENRTTIAMLETAGLWGKRADMIVRGCLPYNAEPPPAVLAGSDITPINAFYVRNHGPVPDIAPQHWRLTVGGLVDNP LTVTYERLTTEFDQHCVVATLACAGNRRAELLRVRQIPGKEPWAHGAISTAQWCGVRLADILQAADVHIDEGLHVAFDAP DVAEEARPIQPYGSSIPLSKALSPEVLLAWQMNSEPLPRAHGGPVRVVVPGFIGARSVKWVTAITVQPGASQNYFQALDY RILPADADADIVGPGEGISLSSLALNCDILDPTDGDDVPAGALTIRGYGMAGDGRSVERVDVSVDDGLTWQQADLHAAPS QWSWRPWSLTVDVEPGPLGITARAWDDTGALQPESAVSLWNPRGYGNNAWARVALRVS
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=364, Percent_Identity=42.8571428571429, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI74099702, Length=364, Percent_Identity=42.8571428571429, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI74099694, Length=364, Percent_Identity=42.8571428571429, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71992535, Length=366, Percent_Identity=37.9781420765027, Blast_Score=236, Evalue=1e-62, Organism=Drosophila melanogaster, GI18859905, Length=362, Percent_Identity=38.121546961326, Blast_Score=235, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40757; Mature: 40626
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00559 MOLYBDOPTERIN_EUK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRGENRTTIAMLETAGLWGKRADMIVRGCLPYNAEPPPAVLAGSDITPINAFYVRNHG CCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEECCC PVPDIAPQHWRLTVGGLVDNPLTVTYERLTTEFDQHCVVATLACAGNRRAELLRVRQIPG CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCC KEPWAHGAISTAQWCGVRLADILQAADVHIDEGLHVAFDAPDVAEEARPIQPYGSSIPLS CCCCCCCCCCHHHHHCHHHHHHHHHHCEEECCCCEEEECCCCHHHHCCCCCCCCCCCCHH KALSPEVLLAWQMNSEPLPRAHGGPVRVVVPGFIGARSVKWVTAITVQPGASQNYFQALD HCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHCC YRILPADADADIVGPGEGISLSSLALNCDILDPTDGDDVPAGALTIRGYGMAGDGRSVER EEEEECCCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEE VDVSVDDGLTWQQADLHAAPSQWSWRPWSLTVDVEPGPLGITARAWDDTGALQPESAVSL EEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE WNPRGYGNNAWARVALRVS CCCCCCCCCCEEEEEEEEC >Mature Secondary Structure TDRGENRTTIAMLETAGLWGKRADMIVRGCLPYNAEPPPAVLAGSDITPINAFYVRNHG CCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEECCC PVPDIAPQHWRLTVGGLVDNPLTVTYERLTTEFDQHCVVATLACAGNRRAELLRVRQIPG CCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCC KEPWAHGAISTAQWCGVRLADILQAADVHIDEGLHVAFDAPDVAEEARPIQPYGSSIPLS CCCCCCCCCCHHHHHCHHHHHHHHHHCEEECCCCEEEECCCCHHHHCCCCCCCCCCCCHH KALSPEVLLAWQMNSEPLPRAHGGPVRVVVPGFIGARSVKWVTAITVQPGASQNYFQALD HCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHCC YRILPADADADIVGPGEGISLSSLALNCDILDPTDGDDVPAGALTIRGYGMAGDGRSVER EEEEECCCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCEEE VDVSVDDGLTWQQADLHAAPSQWSWRPWSLTVDVEPGPLGITARAWDDTGALQPESAVSL EEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEE WNPRGYGNNAWARVALRVS CCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA