| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is pheT [H]
Identifier: 148661446
GI number: 148661446
Start: 1861276
End: 1863771
Strand: Direct
Name: pheT [H]
Synonym: MRA_1661
Alternate gene names: 148661446
Gene position: 1861276-1863771 (Clockwise)
Preceding gene: 148661445
Following gene: 148661448
Centisome position: 42.11
GC content: 68.95
Gene sequence:
>2496_bases ATGCGGCTACCCTACAGCTGGCTGCGCGAGGTGGTTGCGGTCGGCGCTTCGGGCTGGGACGTTACCCCAGGCGAACTCGA GCAGACGCTGTTGCGCATCGGCCACGAGGTCGAAGAGGTCATCCCCCTTGGTCCGGTGGACGGCCCGGTGACCGTGGGGC GGGTGGCCGATATCGAGGAGCTCACCGGCTACAAGAAGCCGATCCGGGCCTGCGCGGTAGATATCGGCGATCGGCAGTAT CGCGAGATTATTTGTGGTGCAACCAATTTCGCGGTTGGTGATCTGGTGGTGGTAGCGCTGCCCGGTGCCACGCTGCCCGG TGGATTCACCATTAGCGCCCGCAAGGCCTACGGTCGCAACTCCGACGGAATGATCTGCTCGGCAGCCGAACTCAATTTGG GCGCAGACCATTCCGGGATCCTGGTGTTGCCCCCCGGAGCCGCCGAGCCCGGAGCTGACGGCGCGGGCGTGCTGGGGCTC GACGACGTGGTCTTCCATCTGGCCATCACCCCAGACCGCGGTTACTGCATGTCGGTGCGCGGCTTGGCCCGCGAGCTCGC GTGCGCCTACGACCTGGACTTCGTCGACCCCGCCAGCAACTCGCGGGTGCCGCCGCTACCCATCGAGGGGCCAGCCTGGC CGCTGACGGTTCAGCCCGAGACGGGGGTGCGCCGGTTCGCGCTACGCCCGGTCATCGGGATCGACCCCGCCGCGGTATCG CCCTGGTGGTTGCAGCGCCGACTGCTGCTCTGCGGTATCCGCGCGACCTGTCCGGCGGTCGACGTGACCAATTACGTGAT GCTCGAACTTGGCCACCCCATGCACGCCCACGACCGCAACCGGATCAGCGGAACCCTCGGAGTGCGGTTCGCCCGGTCCG GCGAGACCGCCGTGACCCTCGACGGTATCGAGCGCAAGCTCGATACCGCCGATGTCCTGATCGTCGACGATGCTGCGACA GCGGCGATCGGCGGCGTGATGGGGGCGGCCAGCACCGAAGTGCGGGCCGACTCCACCGATGTCCTGTTGGAGGCCGCGAT ATGGGACCCGGCTGCGGTATCGCGTACCCAGCGGCGGCTGCACCTGCCTAGCGAGGCCGCCCGTCGTTACGAGCGGACGG TGGACCCGGCCATCTCCGTGGCCGCTTTGGACCGGTGCGCAAGGCTGCTCGCCGACATCGCCGGGGGGGAGGTTTCTCCC ACCCTTACCGACTGGCGGGGTGACCCGCCGTGTGATGACTGGTCACCGCCGCCGATCCGGATGGGAGTCGATGTGCCGGA CCGCATCGCCGGGGTGGCCTATCCGCAGGGCACTACTGCCAGGCGCTTGGCCCAGATCGGCGCGGTGGTGACCCACGACG GCGACACCTTGACCGTGACCCCGCCGAGTTGGCGACCTGATCTGCGGCAACCCGCAGACCTTGTCGAGGAGGTGCTGCGG CTTGAGGGGCTGGAAGTTATCCCGTCGGTGCTGCCACCGGCGCCCGCGGGTCGTGGACTCACCGCTGGGCAGCAGCGCCG TCGCACGATCGGCAGGTCGCTGGCGCTGTCGGGCTATGTCGAGATTCTGCCGACTCCATTTCTGCCGGCCGGTGTGTTCG ATTTGTGGGGGCTGGAAGCCGATGACTCACGGCGCATGACCACGCGGGTGCTCAACCCGCTGGAGGCCGATCGTCCGCAA CTGGCGACCACGCTGCTGCCGGCCCTGCTGGAAGCCTTGGTGCGCAACGTGTCCCGAGGGCTGGTCGACGTCGCGCTGTT CGCCATCGCCCAGGTGGTCCAGCCGACCGAGCAGACGCGCGGTGTCGGGTTGATCCCGGTTGACCGGCGGCCGACCGATG ATGAGATCGCCATGCTGGATGCCTCGCTGCCCCGGCAACCCCAGCACGTCGCGGCGGTGCTGGCCGGACTGCGCGAGCCT CGAGGCCCCTGGGGCCCGGGCCGCCCGGTAGAGGCGGCTGATGCGTTCGAGGCGGTGCGAATCATCGCGCGCGCCAGCCG CGTGGACGTGACCCTGCGGCCGGCCCAATATCTGCCGTGGCATCCGGGCCGGTGCGCGCAGGTGTTCGTCGGGGAAAGCT CGGTTGGTCACGCCGGGCAGCTGCATCCCGCCGTGATCGAGCGCTCGGGTCTGCCGAAAGGCACCTGCGCGGTGGAACTG AACCTAGATGCGATTCCGTGCAGCGCGCCGCTGCCGGCACCCAGGGTGTCGCCGTATCCGGCCGTGTTCCAAGACGTCAG CCTGGTGGTGGCCGCGGACATCCCCGCTCAGGCGGTGGCCGACGCCGTGCGCGCGGGGGCAGGCGACCTGCTGGAGGATA TTGCGTTGTTTGACGTGTTCACCGGCCCGCAGATTGGTGAGCACCGCAAGTCGCTGACCTTCGCGCTGCGGTTTCGTGCG CCGGATCGCACCTTAACCGAAGACGACGCCAGCGCCGCCCGCGATGCCGCTGTGCAAAGCGCAGCCGAACGGGTGGGTGC CGTGCTGCGTGGCTGA
Upstream 100 bases:
>100_bases GGTTGGAACGCACCCTGCAGTTTCGCAACGGCATTCCTGACATGCGCGACATGGTCGAAGGCGACGTCCGATTCTCGTTG CCGTTCGGGGTGGGTGCCTG
Downstream 100 bases:
>100_bases ACCGACTCAGCACGCGTTCAACGAAAATTTGACGACGGCATTTCAGCGCGCCGCGTTTATACCTCGCCGCCCTGTCCGGG TAGCGGCGCCGCCCTAAGGG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEELTGYKKPIRACAVDIGDRQY REIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGL DDVVFHLAITPDRGYCMSVRGLARELACAYDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPVIGIDPAAVS PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIERKLDTADVLIVDDAAT AAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSP TLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQ LATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREP RGPWGPGRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRA PDRTLTEDDASAARDAAVQSAAERVGAVLRG
Sequences:
>Translated_831_residues MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEELTGYKKPIRACAVDIGDRQY REIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGL DDVVFHLAITPDRGYCMSVRGLARELACAYDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPVIGIDPAAVS PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIERKLDTADVLIVDDAAT AAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSP TLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQ LATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREP RGPWGPGRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRA PDRTLTEDDASAARDAAVQSAAERVGAVLRG >Mature_831_residues MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEELTGYKKPIRACAVDIGDRQY REIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGL DDVVFHLAITPDRGYCMSVRGLARELACAYDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPVIGIDPAAVS PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTLDGIERKLDTADVLIVDDAAT AAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSP TLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQ LATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREP RGPWGPGRPVEAADAFEAVRIIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRA PDRTLTEDDASAARDAAVQSAAERVGAVLRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=775, Percent_Identity=31.4838709677419, Blast_Score=332, Evalue=8e-92,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88375; Mature: 88375
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50886 TRBD ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCHHH LTGYKKPIRACAVDIGDRQYREIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRN HHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCC SDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYCMSVR CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEEECCCCCCEEHHH GLARELACAYDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPVIGIDPAAVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHEECCCCCCCCCCCC PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTL HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEE DGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRL CCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHEEEEHHCCCHHHHHHHHHC HLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPCDDWSPPPIR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE MGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR ECCCCCHHHHCCCCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHH LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEA HCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHCCCCC DDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTR CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC GVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREPRGPWGPGRPVEAADAFEAVR CCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH IIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL HHHHHHHCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEE NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVF ECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHC TGPQIGEHRKSLTFALRFRAPDRTLTEDDASAARDAAVQSAAERVGAVLRG CCCCHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCEEECCCCCHHH LTGYKKPIRACAVDIGDRQYREIICGATNFAVGDLVVVALPGATLPGGFTISARKAYGRN HHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCC SDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYCMSVR CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEEECCCCCCEEHHH GLARELACAYDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPVIGIDPAAVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHEECCCCCCCCCCCC PWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFARSGETAVTL HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEE DGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSRTQRRL CCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHEEEEHHCCCHHHHHHHHHC HLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPCDDWSPPPIR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE MGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLR ECCCCCHHHHCCCCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHH LEGLEVIPSVLPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFLPAGVFDLWGLEA HCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHCCCCC DDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTR CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC GVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLREPRGPWGPGRPVEAADAFEAVR CCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH IIARASRVDVTLRPAQYLPWHPGRCAQVFVGESSVGHAGQLHPAVIERSGLPKGTCAVEL HHHHHHHCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEE NLDAIPCSAPLPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVF ECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHC TGPQIGEHRKSLTFALRFRAPDRTLTEDDASAARDAAVQSAAERVGAVLRG CCCCHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]